Package schrodinger :: Package application :: Package bioluminate :: Package actions :: Module configs
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Module configs

Variables [hide private]
  IMPORT_STRUCTURES = {'blast': {'parent_slot': 'runBlast', 'sta...
  SEQUENCE_VIEWER = {'default_order': ['sync_ws', 'open', 'save_...
  ALIGNMENT_ACTIONS = {'anchor': {'parent_slot': 'anchorSelectio...
  FIND_PATTERN_ACTIONS = {'default_order': ['previous', 'next'],...
  ANNOTATE_ACTIONS = {'add_global': {'parent_slot': 'addGlobalAn...
  COLOR_SEQUENCES = {'default_order': ['residue_type', 'residue_...
  VIEWER_NAME_CONTEXT = {'aa_order': ['rename', 'separator_1', '...
  VIEWER_SEQUENCE_CONTEXT = {'align_anchor': {'parent_slot': 'an...
  CONSENSUS_DISPLAY = {'all_proteins': {'base64_icon': '\niVBORw...
  __package__ = 'schrodinger.application.bioluminate.actions'
Variables Details [hide private]

IMPORT_STRUCTURES

Value:
{'blast': {'parent_slot': 'runBlast',
           'status_tip': 'Query using BLAST protein database',
           'text': '&BLAST homology search...',
           'tooltip': 'Query using BLAST protein database'},
 'default_order': ['file', 'pdb', 'workspace'],
 'file': {'parent_slot': 'importFromFile',
          'status_tip': 'Import a structure from a file.',
          'text': '&Browse for File...',
...

SEQUENCE_VIEWER

Value:
{'default_order': ['sync_ws', 'open', 'save_as', 'undo', 'redo'],
 'open': {'status_tip': 'Open a strucuture to be imported?',
          'text': '&Open...',
          'tooltip': 'Open a strucuture to be imported?'},
 'redo': {'base64_icon': '''
iVBORw0KGgoAAAANSUhEUgAAABkAAAAZCAYAAADE6YVjAAAABHNCSVQICAgIfAhkiAAAAA\
lwSFlz
AAAFaAAABWgB9xWXcAAAABl0RVh0U29mdHdhcmUAd3d3Lmlua3NjYXBlLm9yZ5vuPBoAAA\
...

ALIGNMENT_ACTIONS

Value:
{'anchor': {'parent_slot': 'anchorSelection',
            'status_tip': 'Preserve alignment outside of the selection\
',
            'text': 'Anchor Residues Outside Selection'},
 'clear_anchors': {'parent_slot': 'clearAnchors',
                   'status_tip': 'Clear the restricted region',
                   'text': 'Clear Restricted Region'},
 'clear_constraints': {'parent_slot': 'clearConstraints', 'text': 'Cle\
...

FIND_PATTERN_ACTIONS

Value:
{'default_order': ['previous', 'next'],
 'find_pattern': {'parent_slot': 'focusFinder',
                  'shortcut': 'Ctrl+F',
                  'status_tip': 'Find a pattern in the sequences',
                  'text': '&Find Pattern...',
                  'tooltip': 'Find a pattern in the sequences'},
 'next': {'base64_icon': '''
iVBORw0KGgoAAAANSUhEUgAAABkAAAAZCAYAAADE6YVjAAAABHNCSVQICAgIfAhkiAAAAA\
...

ANNOTATE_ACTIONS

Value:
{'add_global': {'parent_slot': 'addGlobalAnnotations',
                'text': 'Add &Global Annotations'},
 'bfactor': {'data': 12,
             'parent_slot': 'addAnnotationAction',
             'text': '&B Factor'},
 'clear': {'parent_slot': 'deleteAnnotations',
           'text': '&Clear Annotations'},
 'collapse': {'parent_slot': 'collapseAllSequences', 'status_tip': 'Co\
...

COLOR_SEQUENCES

Value:
{'default_order': ['residue_type',
                   'residue_similarity',
                   'hydrophobicity',
                   'hydrophilicity',
                   'taylor',
                   'grayscale',
                   'white',
                   'separator_1',
...

VIEWER_NAME_CONTEXT

Value:
{'aa_order': ['rename',
              'separator_1',
              'select_all',
              'unselect_all',
              'invertseparator_2',
              'ann_clear',
              'separator_3',
              'up',
...

VIEWER_SEQUENCE_CONTEXT

Value:
{'align_anchor': {'parent_slot': 'anchorSelection',
                  'status_tip': 'Preserve alignment outside of the sel\
ection',
                  'text': 'Anchor Residues Outside Selection'},
 'align_clear_anchors': {'parent_slot': 'clearAnchors',
                         'status_tip': 'Clear the restricted region',
                         'text': 'Clear Restricted Region'},
 'align_clustal': {'base64_icon': '\niVBORw0KGgoAAAANSUhEUgAAABkAAAAZC\
...

CONSENSUS_DISPLAY

Value:
{'all_proteins': {'base64_icon': '''
iVBORw0KGgoAAAANSUhEUgAAABkAAAAZCAYAAADE6YVjAAAACXBIWXMAAAsTAAALEwEAmp\
wYAAAK
T2lDQ1BQaG90b3Nob3AgSUNDIHByb2ZpbGUAAHjanVNnVFPpFj333vRCS4iAlEtvUhUIIF\
JCi4AU
kSYqIQkQSoghodkVUcERRUUEG8igiAOOjoCMFVEsDIoK2AfkIaKOg6OIisr74Xuja9a89+\
bN/rXX
Pues852zzwfACAyWSDNRNYAMqUIeEeCDx8TG4eQuQIEKJHAAEAizZCFz/SMBAPh+PDwrIs\
...