Package schrodinger :: Package job :: Module remote_command

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Module remote_command

Classes

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CommandError
Used to report external commands that fail.

Functions

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string

which(program, search_path=None)
Search for a file in the given list of directories.

get_home_dir()
Return the user's home directory.

get_rsh_exec()
Return the name of the rsh-compatible program to use for executing remote commands.

shell()
Return the pathname to a Bourne-compatible shell that can be used for running shell commands.

string

remote_command(host, user, command, capture_stderr=False)
Execute a the given command on a particular host.

list

_rsh_cmd(remotehost, remoteuser=None, nostdin=True)
Returns the 'ssh' command needed to execute a remote command on the given host.

rsh_test(hosts)
Test remote commands to and from one or more hosts.

Variables

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logger = log.getLogger('jobc.rcmd')

handler = log.StreamHandler(sys.stdout)

rsh_timeout = 60

rsh_max_retries = 1

test_reverse_rsh = False

schrodinger_dir = '/nfs/builds/objects/OB/alpaca/Linux-x86_64/...

shell_exec = None
hash(x)

rsh_exec = None
hash(x)

rsh_src = None
hash(x)

__package__ = 'schrodinger.job'

Function Details

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which(program, search_path=None)

Search for a file in the given list of directories. Use $PATH if no search path is specified.

Returns the absolute pathname for the first executable found.

Parameters:

rogram - the executable to search for
program (string)

Returns: string

the absolute pathname for the executable found, or None if the program could not be found.

get_home_dir()

Return the user's home directory. (Returns the %PROFILE%' directory for Windows.)

remote_command(host, user, command, capture_stderr=False)

Execute a the given command on a particular host.

Returns a tuple containing the captured output and an error message.

Parameters:

host (string) - the host on which to run the command
user (string) - the user account under which to run the command
command (string) - the command to be executed on the remote machine
capture_stderr (boolean) - should stderr be captured along with stdout?

Returns: string

the captured output from the command

Raises:

CommandError - if the remote command fails

_rsh_cmd(remotehost, remoteuser=None, nostdin=True)

Returns the 'ssh' command needed to execute a remote command on the given host. The actual remote command needs to be appended to the returned string.

Parameters:

host (string) - string
user (string) - string
nostdin (boolean) - should stdin be closed for this command?

Returns: list

the list of command args for the remote command, suitable for use in subprocess functions

Variables Details

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schrodinger_dir

Value:

'/nfs/builds/objects/OB/alpaca/Linux-x86_64/build23'