Package schrodinger :: Package pipeline :: Package stages :: Module gencodes
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Module gencodes

Stage for generating and storing codes for ligands/compounds and variants.

It also recombined input ligands into a number of subjobs specified via -NJOBS argument (If -adjust is used, this number is also adjusted based on the MIN_SUBJOB_STS and MAX_SUBJOB_STS keywords.

Copyright Schrodinger, LLC. All rights reserved.

Classes [hide private]
  GenCodesStage
Stage for generating compound and variant codes, which are stored as properties.
  RecombineStage
Stage for generating compound and variant codes, which are stored as properties.
  RestoreTitlesStage
Stage for copying titles for each input ligand from the 's_pipeline_title_backup' property to the 's_m_title' property.
Functions [hide private]
 
_get_reader(filename, astext=False)
Return a StructureReader object for reading the file Ev:62575 Returns SDReader for files of unknown extension Returns a MaestroTextReader instance if specified file is a Maestro file and astext is True (Ev:61545)
Variables [hide private]
  __doc__ = ...
  __package__ = 'schrodinger.pipeline.stages'
Variables Details [hide private]

__doc__

Value:
"""
Stage for generating and storing codes for ligands/compounds and varia\
nts.

It also recombined input ligands into a number of subjobs specified vi\
a -NJOBS
argument (If -adjust is used, this number is also adjusted based on th\
e
...