[ Identifiers | To Do | Deprecations ]

Identifier Index

[ A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _ ]

E

e (in schrodinger.protein.assignment)	enterEvent() (in sketcherView)	ESP_NONE (in JaguarOptions)
E_f (in schrodinger.application.desmond.simulation_block_test)	enterRule() (in DebugEventListener)	esp_precision (in JaguarAtomicResults)
E_k (in schrodinger.application.desmond.simulation_block_test)	enterRule() (in DebugEventSocketProxy)	espmax (in JaguarResults)
E_x (in schrodinger.application.desmond.simulation_block_test)	enterRule() (in TraceDebugEventListener)	espmean_n (in JaguarResults)
EarlyExitException (in schrodinger.application.desmond.antlr3.exceptions)	enterSubRule() (in DebugEventListener)	espmean_p (in JaguarResults)
EchoMode	enterSubRule() (in DebugEventSocketProxy)	espmin (in JaguarResults)
edge (in _Ring)	enterSubRule() (in TraceDebugEventListener)	etot() (in schrodinger.application.jaguar.output)
Editable (in schrodinger.antibody_db_manage_gui)	Entry (in schrodinger.application.desmond.maestro)	ev_per_hartree (in schrodinger.application.jaguar.constants)
EditableDelegate (in schrodinger.antibody_db_manage_gui)	ENTRY (in Table)	evaluate() (in MetaDynamicsAnalysis)
EditableModel (in schrodinger.antibody_db_manage_gui)	entry (in CtObj)	event() (in sketcher)
EditableProxyModel (in schrodinger.antibody_db_manage_gui)	Entry (in schrodinger.ui.widget.tkinterwidget)	event() (in sketcherGUIMultiColumnToolBar)
EditTrigger	ENTRY (in schrodinger.utils.cmdline)	event() (in sketcherView)
EditTriggers	entry_id (in ProjectRow)	EVENTLOG_DISABLED (in schrodinger.infra.licensing)
ef_precision (in Calculator)	entry_id (in _StructureAtom)	EVENTLOG_INIT_ERR (in schrodinger.infra.licensing)
eff_precision (in Calculator)	ENTRY_PREFIX (in schrodinger.application.desmond.fep_gui)	EVENTLOG_WRITE_ERR (in schrodinger.infra.licensing)
efp_precision (in Calculator)	EntryField (in schrodinger.application.desmond.cwidget)	exc (in schrodinger.application.desmond.antlr3.extras)
efs_precision (in Calculator)	ENTRYFIELD (in Table)	exc_precision (in JaguarResults)
elec (in EnergyComponent)	EntryField (in schrodinger.ui.widget.pmwwidget)	exceptions (in schrodinger.application.desmond.antlr3)
electron_transfer() (in schrodinger.application.jaguar.output)	EntryFieldCell (in schrodinger.ui.widgettable)	excitation_energies() (in schrodinger.application.jaguar.output)
ELECTRONEGATIVITY (in schrodinger.application.moldescriptors)	EntryFieldColumn (in schrodinger.ui.widgettable)	exclmap() (in _FEPIO)
electronic_e() (in schrodinger.application.jaguar.output)	EntryGroup (in schrodinger.application.desmond.maestro)	exclude() (in AddDefinitionDialog)
electrostatic14_energy() (in schrodinger.application.qsite.output)	EntryGroup (in schrodinger.project)	excluded_hets (in schrodinger.application.prime.primefix)
electrostatic_energy() (in schrodinger.application.qsite.output)	EntryRestrictor (in schrodinger.application.desmond.util)	ExcludeFromSelection (in schrodinger.application.bioluminate.pml_menus)
ELEM (in schrodinger.application.desmond.enhanced_sampling.mexpLexer)	EntrySubMenu (in schrodinger.application.bioluminate.pml_menus)	ExcludeInorganicFromSelection (in schrodinger.application.bioluminate.pml_menus)
ELEM (in schrodinger.application.desmond.enhanced_sampling.mexpParser)	EntrySurface (in schrodinger.project)	ExcludeOrganicFromSelection (in schrodinger.application.bioluminate.pml_menus)
element (in _StructureAtom)	enumerate_changeable_states() (in ProtAssign)	ExcludePolymerFromSelection (in schrodinger.application.bioluminate.pml_menus)
elst() (in ComUtil)	enumerate_states() (in amide_changeable)	excludes() (in Definition)
elst() (in ComUtilAppSci)	enumerate_states() (in amine_changeable)	ExcludeSolventFromSelection (in schrodinger.application.bioluminate.pml_menus)
EMBRACE_SPECS (in schrodinger.application.macromodel.input)	enumerate_states() (in carboxyl_changeable)	ExcludeSubMenu (in schrodinger.application.bioluminate.pml_menus)
EmbraceConfSearch (in schrodinger.application.macromodel.input)	enumerate_states() (in changeable)	ExcludeVisibleFromSelection (in schrodinger.application.bioluminate.pml_menus)
EmbraceMinimization (in schrodinger.application.macromodel.input)	enumerate_states() (in histidine_changeable)	exclusion() (in _FFIO)
emit() (in Lexer)	enumerate_states() (in rotatable_changeable)	exclusion_builtin_prop (in schrodinger.trajectory.ffstructure)
emitErrorMessage() (in BaseRecognizer)	enumerate_states() (in water_changeable)	exec_() (in AppFramework)
EmptyIterator (in schrodinger.project)	enumerate_vector_with_rot_angle_2d() (in schrodinger.application.lid.lid2d.utils)	exec_() (in FileDialog)
enable() (in _Step)	Env (in schrodinger.application.desmond.enhsamp)	exec_() (in PhaseDatabaseOpenDialog)
enable() (in Project)	envir (in schrodinger.application.desmond)	exec_() (in ProjectOpenDialog)
enable() (in WidgetTable)	EOF (in schrodinger.application.desmond.antlr3.constants)	execute() (in _Main)
enable() (in _Cell)	EOF (in CharStream)	execute() (in InsertBeforeOp)
enable() (in _Column)	EOF (in schrodinger.application.desmond.antlr3.treewizard)	execute() (in ReplaceOp)
enable() (in _Row)	EOF (in schrodinger.application.desmond.enhanced_sampling.mexpLexer)	execute() (in RewriteOperation)
enable_next() (in Guide)	EOF (in schrodinger.application.desmond.enhanced_sampling.mexpParser)	execute() (in StartDialog)
enable_next() (in Guide)	EOF_TOKEN (in schrodinger.application.desmond.antlr3.tokens)	execute() (in WriteDialog)
enableCpu() (in StartDialog1)	EOR_TOKEN_TYPE (in schrodinger.application.desmond.antlr3.constants)	executeWithWaitCursor() (in _App)
enableCpu() (in StartDialog2)	EPIK (in schrodinger.infra.mm)	EXISTS (in schrodinger.application.bioluminate.propfilter)
enableCpu() (in _SdDetailFrame)	EPIK (in schrodinger.utils.preferences)	exists() (in WidgetTable)
enableCpu() (in _SdJobFrame)	EPIK_CYP (in schrodinger.infra.licensing)	exit() (in Stage)
enableCpu() (in _SdSubjobFrame)	EPIK_EXCLUSION_LIST (in schrodinger.application.prepwizard)	exit_status_BAD_INPUT (in MopacResults)
ENABLED_SYS_TYPE (in ModelSystem)	EPIK_MAIN (in schrodinger.infra.licensing)	exit_status_FATAL (in MopacResults)
enabledChange() (in sketcher)	epn() (in schrodinger.application.jaguar.output)	exit_status_OK (in MopacResults)
enabledChange() (in sketcherGUIMultiColumnToolBar)	epn_precision (in JaguarAtomicResults)	exitDecision() (in DebugEventListener)
enabledChange() (in sketcherView)	eps (in schrodinger.application.desmond.simulation_block_test)	exitDecision() (in DebugEventSocketProxy)
enableMaestroSync() (in SimplifiedSequenceViewer)	epsilon (in schrodinger.application.lid.lid2d.intervaltree2d)	exitRule() (in DebugEventListener)
enclosed_by() (in schrodinger.application.lid.lid2d.utils)	epsilon (in schrodinger.application.lid.lid2d.utils)	exitRule() (in DebugEventSocketProxy)
enclosedBy() (in FirstSecondaryStructure)	epsilon (in schrodinger.application.lid.ligand_interaction_diagram)	exitRule() (in TraceDebugEventListener)
enclosedBy() (in IntervalTree)	EPSILON (in schrodinger.graphics3d.arrow)	ExitStatus (in Job)
enclosedBy() (in SecondSecondaryStructure)	epsilons (in schrodinger.application.lid.lid2d.compute)	exitSubRule() (in DebugEventListener)
enclosedByDetailed() (in IntervalTree)	epsilonS (in schrodinger.application.lid.lid2d.intervaltree2d)	exitSubRule() (in DebugEventSocketProxy)
encode_extended() (in schrodinger.application.desmond.gchart)	epsilons (in schrodinger.application.lid.lid2d.overlap)	exitSubRule() (in TraceDebugEventListener)
encode_simple() (in schrodinger.application.desmond.gchart)	epsilons (in schrodinger.application.lid.lid2d.utils)	EXP (in schrodinger.application.desmond.enhanced_sampling.mexpLexer)
END (in schrodinger.application.desmond.antlr3.treewizard)	epsilons (in schrodinger.application.lid.ligand_interaction_diagram)	EXP (in schrodinger.application.desmond.enhanced_sampling.mexpParser)
end_alpha (in schrodinger.application.lid.lid2d.draw)	EQ (in schrodinger.application.desmond.enhanced_sampling.mexpLexer)	exp (in schrodinger.protein.assignment)
end_drawing() (in schrodinger.application.desmond.maestro)	EQ (in schrodinger.application.desmond.enhanced_sampling.mexpParser)	exp2 (in schrodinger.protein.assignment)
end_geometry() (in schrodinger.application.jaguar.output)	eq_re (in GenOptions)	Expand (in schrodinger.application.bioluminate.pml_menus)
end_progress() (in schrodinger.application.bioluminate.pml_menus)	equal (in schrodinger.protein.assignment)	expand() (in Definition)
end_scan() (in schrodinger.application.jaguar.output)	EQUALS (in schrodinger.application.bioluminate.propfilter)	expand() (in SmartsCriterion)
end_time (in schrodinger.application.desmond.cmj)	equals() (in TreeWizard)	expand_ark_string() (in schrodinger.utils.sea)
end_time() (in schrodinger.application.jaguar.output)	equival_props (in schrodinger.application.mcpro.read_output)	expand_macro() (in CfgAtom)
endBacktrack() (in DebugEventListener)	erf (in schrodinger.application.desmond.predict_remd_temp)	expand_macro() (in Key)
endBacktrack() (in DebugEventSocketProxy)	erf (in schrodinger.application.desmond.remd)	expand_macro() (in schrodinger.application.desmond.util)
endBacktrack() (in DebugParser)	ERR_CALL (in schrodinger.protein.assignment)	expand_macro() (in schrodinger.utils.sea)
EndEditHint	ERR_DEFAULT (in schrodinger.protein.assignment)	expand_macro_old() (in schrodinger.utils.sea)
endGeopt() (in TextParser)	ERR_DEFAULT2 (in schrodinger.protein.assignment)	expand_sea_string() (in schrodinger.utils.sea)
endGroup() (in Preferences)	err_handler() (in DesmondJob)	expand_solutions() (in hbond_cluster)
endIRC() (in TextParser)	ERR_IGNORE (in schrodinger.protein.assignment)	expComp() (in mexpParser)
endOS() (in Preferences)	ERR_LOG (in schrodinger.protein.assignment)	expComp_return (in mexpParser)
ENDPATH (in schrodinger.infra.licensing)	ERR_PRINT (in schrodinger.protein.assignment)	expected_num_atoms (in schrodinger.application.lid.lid2d.compute)
endResync() (in DebugEventListener)	ERR_RAISE (in schrodinger.protein.assignment)	expecter() (in BinaryThreadSyntax)
endResync() (in DebugEventSocketProxy)	ERR_WARN (in schrodinger.protein.assignment)	expecter() (in MetaSyntax)
endResync() (in DebugParser)	ERROR (in GenOptions)	expecter() (in RMSDSyntax)
endResync() (in BaseRecognizer)	ERROR (in JobInputFrame)	expecter() (in SimpleSyntax)
endScan() (in TextParser)	ERROR (in JobInputFrame)	expecter() (in ThreadSyntax)
ENDSWITH (in schrodinger.application.bioluminate.propfilter)	ERROR (in schrodinger.ui.widget.tkinterwidget)	EXPIREDKEYS (in schrodinger.infra.licensing)
eneg_prop (in MopacResults)	ERROR (in schrodinger.utils.log)	expm1 (in schrodinger.protein.assignment)
Energy (in schrodinger.application.desmond.simulation_block_test)	error() (in DFA)	EXPORT_IMAGE_HEIGHT (in schrodinger.application.report2d)
energy (in JaguarResults)	error() (in Stage)	EXPORT_IMAGE_WIDTH (in schrodinger.application.report2d)
ENERGY_BULK (in schrodinger.application.watermap.watermap_scoring)	error() (in AppFramework)	EXPORT_NOSCALE_SCALE (in schrodinger.application.report2d)
energy_criterion (in Minimizer)	error() (in AppFramework)	exportAllTables() (in ReportFrame)
ENERGY_LISTING_SPECS (in schrodinger.application.macromodel.input)	error() (in CriterionParser)	exportCurrentTable() (in ReportFrame)
energy_lj_repulsive_only (in Minimizer)	error() (in DefinitionParser)	exportFile() (in schrodinger.infra.propedit)
energy_no_electrostatics (in Minimizer)	error_dialog() (in schrodinger.application.desmond.gui)	exportReceptor() (in proteinHandler)
energy_precision (in JaguarResults)	error_handler (in schrodinger.infra.mm)	exportTable() (in DBManagePanel)
energy_precision (in QSiteResults)	error_pattern (in ReturnCode)	exportTables() (in ReportFrame)
energy_prop (in MopacResults)	ErrorHandler (in schrodinger.infra.mmerr)	expr() (in mexpParser)
energy_term_pattern (in EnergyGroupAnalysis)	errorMessage1 (in schrodinger.application.mcpro.ddg)	expr_return (in mexpParser)
EnergyComponent (in schrodinger.application.desmond.energygroup)	errorMessage1 (in schrodinger.application.mcpro.fep)	expression_error() (in CriterionParser)
energygroup (in schrodinger.application.desmond)	errorMessage1 (in schrodinger.application.mcpro.lrm)	exprOrBind() (in mexpParser)
EnergyGroup (in schrodinger.application.desmond.energygroup)	errorMessage1 (in schrodinger.application.mcpro.mc)	exprOrBind_return (in mexpParser)
EnergyGroupAnalysis (in schrodinger.application.desmond.energygroup)	errorMessage1 (in schrodinger.application.mcpro.mini)	Extend (in schrodinger.application.bioluminate.pml_menus)
EnergyListing (in schrodinger.application.macromodel.input)	errorMessage1 (in schrodinger.application.mcpro.solvent)	extend() (in Structure)
ENGERY_GROUP_PREFIX (in schrodinger.application.desmond.energygroup)	errorMessage2 (in schrodinger.application.mcpro.ddg)	extend() (in List)
ENGINE (in schrodinger.application.desmond.cmj)	errorMessage2 (in schrodinger.application.mcpro.fep)	extend_phosphate_states() (in schrodinger.application.prepwizard)
Engine (in schrodinger.application.desmond.cmj)	errorMessage2 (in schrodinger.application.mcpro.lrm)	extend_sulfate_states() (in schrodinger.application.prepwizard)
enhanced_sampling (in schrodinger.application.desmond)	errorMessage2 (in schrodinger.application.mcpro.mc)	extend_targeted_to_hyds() (in ProtAssign)
enhsamp (in schrodinger.application.desmond)	errorMessage2 (in schrodinger.application.mcpro.mini)	EXTENDED_CODE (in schrodinger.application.desmond.gchart)
enrichment (in schrodinger.analysis)	errorMessage2 (in schrodinger.application.mcpro.solvent)	EXTENDED_ENCODING_CHAR (in schrodinger.application.desmond.gchart)
ensClassChanged() (in EnsembleClassFrame)	errorNode() (in DebugEventListener)	EXTENDED_ENCODING_RANGE (in schrodinger.application.desmond.gchart)
Ensemble (in schrodinger.application.glide.ensemble_selection)	errorNode() (in DebugEventSocketProxy)	EXTENDED_ENCODING_RESOLUTION (in schrodinger.application.desmond.gchart)
ensemble_selection (in schrodinger.application.glide)	errorNode() (in DebugTreeAdaptor)	ExtendSubMenu (in schrodinger.application.bioluminate.pml_menus)
EnsembleClassFrame (in schrodinger.application.desmond.gui)	errorNode() (in BaseTreeAdaptor)	EXTENSIONS (in schrodinger.utils.fileutils)
EnsembleLigand (in schrodinger.application.glide.xp6classes)	errorNode() (in TreeAdaptor)	Extern
EnsembleSelection (in schrodinger.application.glide.ensemble_selection)	ESC_KEY (in Rama)	extract (in ConformerRmsd)
EnsembleTab (in schrodinger.application.desmond.gui)	escape_string() (in schrodinger.application.desmond.cmj)	extract() (in Structure)
ensure_proper_extension() (in schrodinger.application.bioluminate.pml_menus)	escapeNewlines() (in DebugEventSocketProxy)	extract_cfg() (in schrodinger.application.desmond.config)
enter() (in _Step)	ESP (in MopacCalculation)	extract_cfg() (in schrodinger.application.desmond.mdkey)
enter_next() (in Guide)	esp_analysis() (in schrodinger.application.jaguar.output)	extract_properties() (in schrodinger.pipeline.stages.phase)
enter_scope() (in binding)	esp_analysis_precision (in JaguarResults)	extractInformationFromTreeNodeStream() (in RecognitionException)
enterAlt() (in DebugEventListener)	ESP_ATOMS (in JaguarOptions)	extractSolventFromSt() (in SystemBuilderInput)
enterAlt() (in DebugEventSocketProxy)	ESP_ATOMS_AND_BOND_MIDPOINTS (in JaguarOptions)	extractStructure() (in Sequence)
enterDecision() (in DebugEventListener)	esp_balance (in JaguarResults)	extractStructure() (in _Chain)
enterDecision() (in DebugEventSocketProxy)	esp_c (in schrodinger.infra.mopac)	extractStructure() (in _Molecule)
enterEvent() (in ColorLabel)	esp_charge_prop (in MopacResults)	extractStructure() (in _Residue)
enterEvent() (in _App)	esp_charges() (in schrodinger.application.jaguar.output)	extractStructure() (in _Ring)
enterEvent() (in TwoDWidget)	esp_fit_atoms() (in schrodinger.application.jaguar.output)	extras (in schrodinger.application.desmond.antlr3)
enterEvent() (in sketcher)	esp_fit_atoms_and_bonds() (in schrodinger.application.jaguar.output)	EYE (in schrodinger.application.bioluminate.actions.icons)
enterEvent() (in sketcherGUIMultiColumnToolBar)	esp_local_polarity (in JaguarResults)