Package schrodinger :: Module antibody_db_manage_gui

Module antibody_db_manage_gui

Script used to create and add structures to an antibody database, remove structures and edit properties.

Classes

Editable
A table class that allows editing of cells

EditableDelegate
The table delegate, modified to shade the background of read-only cells, align data types accordingly and store data in the model when the user edits a cell.

EditableModel
A model that allows the user to edit cells in some columns of the table.

EditableProxyModel
A proxy model that allows editing and custom filtering

OrderedDB
Adds a method to the parent class psd.PrimeStructureDB to return all the values in a column ordered by a specific key

SearchType
Information about and widgets for each set of structures that are to be added to the Database

ColumnSelectDialog
Dialog that allows the user to specify what columns to search on

AdvancedOptionsPanel
The panel to change advanced options

DBManagePanel
The Main Panel Class

Functions

[hide private]

str

trim_pathname(path, length=60)
Ensure that a string is no longer than length, cutting off the beginning of it and prepending with '...' if necessary.

panel()
Top-level function for bringing up the panel.

check_baseline_args()

Variables

[hide private]

__doc__ = ...

maestro = None
hash(x)

my_usage = '$SCHRODINGER/run antibody_db_manage_gui.py'

READ_ONLY_COLOR = QtGui.QColor(235, 235, 235)

FLOAT_FORMAT = '%.2f'

DEFAULT_REGIONS = set(['FR1', 'FR2', 'FR3'])

VL_DEFAULT = 55

VH_DEFAULT = 50

FR_DEFAULT = 65

PDB = 'pdb'

MAESTRO_TYPE = 'maestro'

PREFERENCE_GROUP = 'antibody_general'

DEFAULT_DB_PREF = 'defaultDB'

mypanel = None
hash(x)

__package__ = 'schrodinger'

Function Details

[hide private]

trim_pathname(path, length=60)

Ensure that a string is no longer than length, cutting off the beginning of it and prepending with '...' if necessary.

Parameters:

path (str) - The string to modify
length (int) - The maximum length of the string

Returns: str

A string of maximum size = length

Variables Details

[hide private]

doc

Value:

"""
Script used to create and add structures to an antibody database, remo
ve
structures and edit properties.

Copyright Schrodinger, LLC. All rights reserved.
"""