Module assignbondorders


Classes

AssignBondOrders

Functions

_add_bond_entry
_assign_templated_residue
_genBondsDict
_residue_atom_subset
assign_st
calculate_average_angle
calculate_dihedral
debug
debugbond
debugbonders
debuggroup
do_rings_share_atoms
get_atom_radius
get_neighbors
get_rings_in_group
get_single_bond_length
isMetal
order_ring_or_chain
orders_assigned

Variables

ASSIGNED_AROMATIC
DEBUG
DEBUG_AROMATIC
DEBUG_BOND_SCORE
DEBUG_GROUP
NOT_AROMATIC
NOT_ASSIGNED
__package__
_charges_string
_new_pdb_names
_template_strings
actinide_series
alkali_metals
alkaline_earth_metals
all_metals
lanthanide_series
logger
maxvalence
other_metals
transition_metals

[hide private]