Download Center
Third-party Programs
Please note: Users of Prime 1.2012 and higher do not need to
use the PROF or CLUSTALW software in order to increase the
accuracy of alignments.
Two distinct third-party secondary structure prediction programs can
be used to increase the accuracy of, and get better results from,
Prime. One of these programs (SSPRO) is already bundled with Prime and
the other (PSIPRED V2.61) may be
manually installed by you, at your election, and subject to license terms,
if any, applicable to it, by following the link below to the
third-party web site where you may download the third-party program and
then install it.
Below you will find the link to the third-party web site. If you opted to download the third-party program, please
click here for instructions on how to compile and install it.
The PSIPRED home page is located at:
http://bioinf.cs.ucl.ac.uk/psipred/
and
contains information about the program, referrals to terms of use
and/or license terms (in the README file), and a link to download the
program. Instructions for installing the program for use with Prime can be found
here.
