- Agenda
Wednesday, October 19, 2011
Morning Workshop 1: Prediction and Optimization of Target Structures
Instructors: David Rinaldo and Jianxin Duan
- Beware of pitfalls in PDB structures
- Resolving problems in target structures
- Cheminformatics analysis
- Impact of optimal preparation - how to achieve it
- Applications covered include PrimeX, Prime, Protein Preparation Wizard, and
Desmond
Afternoon Workshop 2: Lead Finding - Exploring Various Approaches
Instructors: Daniel Cappel and Jas Bhachoo
- How to decide on lead series to move forward with
- Library comparison, analysis, and hole filling
- Cheminformatics analysis
- Shape-based screening
- Virtual screening
- R-group analysis and Core Hopping
- Applications covered include Canvas, Phase, Glide, and KNIME
Thursday, October 20, 2011
Morning Workshop 3: Lead Optimization Guided by Hydration Energetics
Instructors: Daniel Robinson and Jas Bhachoo
- Calculation and analysis of hydration sites in active sites
- Approaches to lead optimization
- Guidance in design projects
- High-precision calculations
- Applications covered include WaterMap, MM-GBSA, Glide, and MacroModel