Schrödinger Applications Scientist Jas Bhachoo and Senior Scientist Susanne Salzmann will be hosting a workshop from 9.30 to 16.30 on Wednesday, April 18th, 2012 in Warsaw, Poland. This workshop is being co-hosted with the Interdisplinary Centre of Mathematical and Computational Modeling (ICM).
Agenda
09.30 Welcome and introduction
09.45 Session I: Lead finding - Exploring various approaches
- How to decide which lead series to move on with
- Library comparison, analysis, and hole filling
- Cheminformatics analysis
- Shape-based screening
- Virtual screening
- R-group analysis, core hopping
12.00 Lunch break
13.00 Session II: Efficient usage
- Workflows and command line examples
14.40 Session III: GPCR Modeling - Integrated tools in Schrödinger software
- Generating alignments
- Homology modeling of GPCRs
- Prime refinement modules
- Induced Fit Docking to tune a model for a particular ligand series
- Selecting a reasonable model: Observations with docking and
pharmacophores
15.30 Session IV: Introduction to Schrödinger QM tools and methods
- Introduction to the Jaguar interface
- Introduction to functionals and basis sets
- Geometry optimization, symmetry, and frequencies
- Calculating and visualizing properties
- A selection from Hot-Topics (NMR shifts, pKas, Spectra, QSite)
16.15 Summary and discussion
16.30 Close
Registration
If you wish to participate, please register here.

