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Article ID: 154 - Last Modified:

I tried to align my GPCR sequence to my template using the "Align GPCR" mode and I get a Blast error "non-zero return code." What is causing this?

This error is likely occurring because the BLAST GPCR files (gpcr.*) are not installed in the third party database ($SCHRODINGER_THIRDPARTY/database/blast). To get these files, run $SCHRODINGER/update_blast.

Keywords: Prime, GPCR, Alignment, Maestro

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