Article ID: 356 - Last Modified: May 10, 2011
Is it possible to assign bond orders to PDB ligands from the command line?
Yes, with the following command:
$SCHRODINGER/run -FROM maestro fix_bond_orders.py input.mae output.mae
Keywords: ligand preparation, assign bond orders Protein Preparation Wizard
Type the words or phrases on which you would like to search, or click here to view a list of all
Knowledge Base articles