Knowledge Base

Article ID: 530 - Last Modified:

My CSearch job appears to finish and I get a message saying it has been incorporated into the Project Table. However, the results aren't there, and I get this warning:

QInotifyFileSystemWatcherEngine::addPaths: inotify_add_watch failed: No such file or directory
QFileSystemWatcher: failed to add paths:

WARNING : MMPROJ ERROR(-4): mproj_incorporate_jobfe2()(): Failed to open structure file '/home/user/project/xxxx/maestro/TEST-out.maegz' for reading.
The job may have failed.

It appears that the issue is not with incorporation, but that the job output file appears to be missing, indicating a failed job, which would explain why it is not incorporated. Ensure that the job is not attempting to run in parallel on a single structure, as MacroModel does not use parallel processing on single structures. It is only when multiple structures are being processed that you can run on several processors and split the job into several subjobs. Please try re-running the same job on a single CPU and see if it makes a difference. Also, try reducing the number of subjobs. Check the para_bmin CSearch log file to see if the output file jobname-out.maegz is present, and if it has any structures or is an empty file.

Keywords: inotify_add_watch error, Maestro, MacroModel

Back to Search Results

Was this information helpful?

What can we do to improve this information?


To ask a question or get help, please submit a support ticket or email us at help@schrodinger.com.
Knowledge Base Search

Type the words or phrases on which you would like to search, or click here to view a list of all
Knowledge Base articles