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Article ID: 60 - Last Modified:

How do I run extended loop sampling or cooperative loop sampling jobs from the command line?

The command to run for extended and cooperative loop refinements is multirefine:

$SCHRODINGER/multirefine [options] input_file

Other Prime refinement jobs (default loop sampling, minimization, side chain prediction) use the following command:

$SCHRODINGER/refinestruct [options] input_file

Keywords: Prime, refinement, command line

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