Article ID: 83 - Last Modified: May 4, 2011
How do I generate 2D sdf files from my 3D structures ?
There is a converter in the Schrodinger utilities directory, canvasConvert, with this feature. Here is the sample usage which incorporates the "-2D" flag
$SCHRODINGER/utilities/canvasConvert -imae input.mae -osd output.sdf -2D
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