The Spring 2008 Schrödinger User Symposium featured presentations on a variety of both real-world applications and methodological developments. Below is a selected list of publications describing work that was presented at the 2008 Schrödinger User Symposium.

• Arkin IT, Xu H, Jensen MØ, Arbely E, Bennett ER, Bowers KJ, Chow E, Dror RO, Eastwood MP, Flitman-Tene R, Gregersen BA, Klepeis JL, Kolossváry I, Shan Y, Shaw DE. "Mechanism of Na+/H+ Antiporting." Science, 2007, 317, 799-803.
• Brewer CT, Brewer G, Butcher RJ, Carpenter EE, Schmiedekamp AM, Viragh C. "Synthesis and characterization of a spin crossover iron(ii)-iron(iii) mixed valence supramolecular pseudo-dimer exhibiting chiral recognition, hydrogen bonding, and π-π Interactions." Dalton Transactions, 2007, 3, 295-298
• Costanzi S. "On the applicability of GPCR homology models to computer-aided drug discovery: a comparison between in silico and crystal structures of the beta2-adrenergic receptor." J. Med. Chem., 2008, 51, 2907-2914
• Guimarães CRW, Cardozo M. "MM-GB/SA Rescoring of Docking Poses in Structure-Based Lead Optimization." J. Chem. Inf. Model., 2008, 48, 958–970
• Kumar RJ, Chebib M, Hibbs DE, Kim HL, Johnston GA, Salam NK, Hanrahan JR. "Novel gamma-Aminobutyric Acid rho1 Receptor Antagonists; Synthesis, Pharmacological Activity and Structure-Activity Relationships." J. Med. Chem., 2008, 51, 3825-3840
• Podvinec M, et al. "Docking for neglected diseases as community efforts" in Computational Structural Biology: Methods and Applications, World Scientific Press, Singapore, 2008
• Rossi KA, Weigelt CA, Nayeem A, Krystek SR Jr. "Loopholes and missing links in protein modeling." Protein Sci., 2007, 16, 1999-2012