Below are recently published papers highlighting applications using Schrödinger software:
Friesner, R.A.; Murphy, R. B.; Repasky, M. P.; Frye, L. L.; Greenwood, J. R.; Halgren,T. A.; Sanschagrin, P. C.; Mainz, D. T., "Extra Precision Glide: Docking and Scoring Incorporating a Model of Hydrophobic Enclosure for Protein-Ligand Complexes", J. Med. Chem., 2006, 49, 6177–6196.
Lyne, P. D.; Lamb, M. L.; Saeh, J. C., "Accurate Prediction of the Relative Potencies of Members of a Series of Kinase Inhibitors Using Molecular Docking and MM-GBSA Scoring", J. Med. Chem., 2006, 49, 4805–4808.
Ragusa, A.; Hayes, J. M.; Light, M. E.; Kilburn, J. D., "Predicting Enantioselectivity: Computation as an Efficient "Experimental" Tool for Probing Enantioselectivity", Eur. J. Org. Chem., 2006, 2006, 3545–3549.