schrodinger.application.bioluminate.anarci.loop_ranges module¶
This module defines a class LoopRange which can be used to determine whether a given residue is between two other given residues in an insert-coded numbering scheme. This is especially necessary because IMGT uses inverted-order insert codes, and we need to be able to carefully define that behavior.
- schrodinger.application.bioluminate.anarci.loop_ranges.is_imgt_ins_code(ins_code)¶
- Check if the insertion code is represented as an integer like in IMGT
numbering
- class schrodinger.application.bioluminate.anarci.loop_ranges.LoopRange(start: schrodinger.application.bioluminate.anarci.anarci_adapter.ResInfo, end: schrodinger.application.bioluminate.anarci.anarci_adapter.ResInfo)¶
Bases:
object- __init__(start: schrodinger.application.bioluminate.anarci.anarci_adapter.ResInfo, end: schrodinger.application.bioluminate.anarci.anarci_adapter.ResInfo)¶
- __contains__(item: schrodinger.application.bioluminate.anarci.anarci_adapter.ResInfo)¶
- class schrodinger.application.bioluminate.anarci.loop_ranges.ImgtLoopRange(start: schrodinger.application.bioluminate.anarci.anarci_adapter.ResInfo, end: schrodinger.application.bioluminate.anarci.anarci_adapter.ResInfo)¶
Bases:
schrodinger.application.bioluminate.anarci.loop_ranges.LoopRange- __contains__(item: schrodinger.application.bioluminate.anarci.anarci_adapter.ResInfo)¶