Tutorials

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Results 43 results

Title Keywords Workshop Files Additional Resources Product(s) Referenced
Building Homology Models with Prime: A Case Study with Factor Xa homology modeling, structure prediction and analysis, sequence alignment PDF Seminars Prime
Conformational Analysis for Small Molecules using Macromodel/ConfGen scan​ ​torsions, ​​conformations, ​clustering, ​optimization, ​contour, linker-atom, ​energy​ ​barrier, ​small​ ​molecule PDF Seminars MacroModel ConfGen
Interactive Enumeration with MS Combi Workshop Tutorial combinatorial chemistry, enumeration, R-group, functionalization HTML Videos, Seminars MS Combi
Building Amorphous Polymers Workshop Tutorial polymer, polymer chain, thermoplastic, elastomer HTML Seminars
Building a Coarse-Grained Polymer Model Workshop Tutorial dissipative particle dynamics, polymer, coarse-grained, mesoscale, repulsive harmonic potentials HTML Seminars MS Jaguar
Drug Development with Macrocycles Workshop Tutorial macrocycles, docking, Prime Sampling, ligand enumeration, FEP+ HTML Seminars Prime
Understanding Basis Sets and Density Functionals Workshop Tutorial basis set, choice, functional, best practice, combination HTML Seminars Jaguar
Computing Atomic Charges with Jaguar Workshop Tutorial atomic​ ​charges, ​ ​Mulliken​ ​charges, ​ ​ESP​ ​charges, ​ ​stockholder, partitioning​ ​schemes PDF Seminars Jaguar
Accounting for Protein Flexibility overlay, ​​align, ​binding​ ​site, ​temperature, ​dock, ​soft, ​side chain, ​loop, induced​ ​fit PDF Seminars Glide Induced Fit
Transition State Search with AutoTS Workshop Tutorial Transition-state, chemical reaction, barrier, rate, saddle point PDF Seminars Jaguar