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Biologocs suite
Comprehensive Protein Modeling
Complete set of homology modeling tools, including both rapid and advanced methods
Chimeric and multimeric models
Advanced sequence tools for multiple alignment, with extensive annotation options
Protein structure quality analysis

Identification of consensus elements in structural families/homologs
Advanced features for protein engineering
Protein aggregation prediction
Identification of hot spots for proteolysis, glycosylation, deamidation, and oxidation
Residue-based analysis of energies, solvent-accessible surface areas, and hydropathy
Cysteine scanning to identify residue mutations for potential cysteine-cysteine
  disulfide bonds
Automated residue scanning
 to predict relative stabilities as well as changes in
  solvent‑accessible surface area, pKa, and hydropathy
Antibody modeling
Automated intuitive workflow
Prediction of CDR from sequence
Rapid prediction using curated antibody database
Advanced ab initio loop prediction using Prime
Database management tools for simple incorporation of new/proprietary structures, and
  allows use of multiple databases in modeling
State-of-the-art protein-protein docking
Well-validated docking code, PIPER; for more information please visit the PIPER website.
Special antibody and multimer modes
Advanced simulations
Access to Schrödinger simulation tools
• Advanced molecular dynamics (MD)
• Extensive Free Energy Perturbation (FEP) tools
Large-scale, low mode (normal) search for domain movement
Quantum mechanics/molecular mechanics (QM/MM) predictions of binding site reactivity


Download our whitepaper on Macrocycle and Restrained Peptide Simulations


An introduction to Biologics Suite

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