- Publication
- Sep 8, 2015
Improved Methods for Side Chain and Loop Predictions via the Protein Local Optimization Program: Variable Dielectric Model for Implicitly Improving the Treatment of Polarization Effects
Zhu, et al. J. Chem. Theory Comput., 2007, 3, 2108-2119- Publication
- Sep 8, 2015
Closing the side-chain gap in protein loop modeling
Rossi, et al. J. Comput. Aided Mol. Des., 2009, 23, 411-418- Publication
- Sep 8, 2015
Exploring Structural Variability in X-Ray Crystallographic Models Using Protein Local Optimization by Torsion-Angle Sampling
Knight, et al. Acta Crystallogr., Sect. D: Biol. Crystallogr., 2008, 64, 383-396- Publication
- Sep 8, 2015
Further Characterization of the [Fe-Fe]-Hydrogenase Maturase’ HydG
Tron, et al. Eur. J. Inorg. Chem., 2011, 7, 1121-1127- Publication
- Sep 8, 2015
Successful prediction of the intra- and extracellular loops of four G-protein-coupled receptors
Goldfeld, et al. PNAS, 2011, 108(20), 8275-8280- Publication
- Sep 8, 2015
A molecular mechanics approach to modeling protein-ligand interactions: Relative binding affinities in congeneric series
Rapp, et al. J. Chem. Inf. Model., 2011, 51(9), 2082-2089- Publication
- Sep 8, 2015
Loopholes and missing links in protein modeling
Rossi, et al. Protein Sci., 2007, 16, 1999-2012- Publication
- Sep 8, 2015
Multiscale Optimization of a Truncated Newton Minimizer and Application to Proteins and Protein-Ligand Complexes
Zhu, et al. J. Chem. Theory Comput., 2007, 3, 640-648- Publication
- Sep 8, 2015
Assignment of Polar States for Protein Amino Acid Residues Using an Interaction Cluster Decomposition Algorithm and its Application to High Resolution Protein Structure Modeling
Li, et al. Proteins: Structure, Function, and Bioinformatics, 2007, 66, 824-837- Publication
- Sep 8, 2015
Conformational Changes in Protein Loops and Helices Induced by Post-Translational Phosphorylation
Groban, et al. PLoS Computational Biology, 2006, 2, 238-250- Publication
- Jul 17, 2015
Consensus Induced Fit Docking (cIFD): Methodology, validation, and application to the discovery of novel Crm1 inhibitors
Kalid, et al. J. Comput. Aided Mol. Des., 2012, 26, 1217-1228- Publication
- Jul 17, 2015
Improved docking of polypeptides with Glide
Tubert-Brohman, et al. J. Chem. Inf. Model., 2013, 53(7), 1689-1699
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