Background

Resources

Filter

Type
Topic
Product
Structure-Based Drug Discovery Without a Structure: Enabling Accurate FEP+ Predictions for Challenging Targets and ADMET Anti-Targets Webinar Life Science
  • Sep 28, 2023
Structure-Based Drug Discovery Without a Structure: Enabling Accurate FEP+ Predictions for Challenging Targets and ADMET Anti-Targets

In this webinar, we showcase the successful utilization of unique technologies and dedicated workflows to enable accurate FEP+ predictions.

Beyond the Lab: Unleashing the Potential of In Silico Modeling in Drug Product Formulation Webinar Life Science
  • Sep 14, 2023
Beyond the Lab: Unleashing the Potential of In Silico Modeling in Drug Product Formulation

In this webinar, we explore Schrödinger’s leading molecular modeling and machine learning platform.

Design of a Highly Selective, Allosteric, Picomolar TYK2 Inhibitor in Clinical Development Webinar Life Science
  • Sep 7, 2023
Design of a Highly Selective, Allosteric, Picomolar TYK2 Inhibitor in Clinical Development

In this webinar, we highlight key moments from the discovery of this potentially best-in-class selective, allosteric, picomolar inhibitor of TYK2.

Chinese: Physics-based Design of Bifunctional Degraders, Virtual 基于物理理论设计的双功能降解剂,网络讲座录制 Webinar Life Science
  • Sep 6, 2023
Chinese: Physics-based Design of Bifunctional Degraders, Virtual 基于物理理论设计的双功能降解剂,网络讲座录制

具有两个配体和一个 Linker 的双功能 分子能够结合E3连接酶与靶蛋白,从而促使靶蛋白降解。

Case-study_MALT1-inhibitor Webinar Life Science
  • Jul 20, 2023
Japanese: Schrödinger デジタル創薬セミナー Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~

Mucosa-associated Lymphoid Tissue Lymphoma Translocation Protein 1 (MALT1) is a genetically validated target for the treatment of diseases associated with lymphocyte regulation.

In Silico Driven Drug Discovery of Integrin Inhibitors for Unmet Medical Need Webinar Life Science
Chinese: LiveDesign 转变合作式的药物发现 | LiveDesign transforming collaborative drug discovery Webinar Life Science
  • Jul 7, 2023
Chinese: LiveDesign 转变合作式的药物发现 | LiveDesign transforming collaborative drug discovery

In this webinar, we present a demonstration of our enterprise informatics platform solution, LiveDesign, which brings together assay data, model results, idea capture, and collaborative workflows to accelerate the drug discovery and design process

Japanese: Schrödinger デジタル創薬セミナー Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第2回 Webinar Life Science
  • Jun 27, 2023
Japanese: Schrödinger デジタル創薬セミナー Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第2回

Inhibitors of integrin αvβ6 have the potential to treat fibrotic disease through blockage of the TGFβ pathway.

The Predict-First Paradigm: How Digital Chemistry is Changing Drug Discovery Webinar Life Science
  • Jun 21, 2023
The Predict-First Paradigm: How Digital Chemistry is Changing Drug Discovery

In this webinar, we walk through the digital chemistry strategy used by Schrödinger’s Therapeutics Group, which has led to several successful clinical-stage drug candidates.

Computational drug design and chemo-informatics: a hands-on course at the University of Antwerp Webinar Life Science
  • Jun 15, 2023
Computational drug design and chemo-informatics: a hands-on course at the University of Antwerp

During the theoretical sessions, students learn about chemo-informatics and virtual screening, which includes concepts such as chemical fingerprints, molecular similarity, clustering, machine learning models, and virtual screening performance metrics.

Into the Clinic: Developing potent and selective kinase inhibitors using at-scale FEP and protein FEP: a Wee1 case study Webinar Life Science
  • May 9, 2023
Into the Clinic: Developing potent and selective kinase inhibitors using at-scale FEP and protein FEP: a Wee1 case study

In this webinar, we discuss the discovery of novel Wee1 kinase inhibitors using a strategy that couples ligand free energy calculations with protein free energy calculations to simultaneously find promising chemical matter and de-risk for off-target liabilities.

Advancing a Pipeline of Drug Discovery Programs Using Diverse Machine Learning Strategies Coupled with Physics-Based Simulations Webinar Life Science
  • Apr 27, 2023
Advancing a Pipeline of Drug Discovery Programs Using Diverse Machine Learning Strategies Coupled with Physics-Based Simulations

In this webinar, we describe how we are integrating machine learning strategies with physics-based modeling technologies within Schrödinger’s Therapeutics Group.

Events

Accelerating sustainable chemical innovation with physics-powered AI and predictive modeling Webinar Materials Science
  • Jul 23, 2026
Accelerating sustainable chemical innovation with physics-powered AI and predictive modeling

Join us for a webinar with Innovation Research Interchange and learn how the Fast-Moving Consumer Goods (FMCG) sector is currently navigating a significant transition driven by a global consumer shift toward “clean label” products and high-transparency ingredient lists.

Standing out in a competitive landscape: The power of structure-based biologics design Webinar Life Science
  • Jul 29, 2026
Standing out in a competitive landscape: The power of structure-based biologics design

Join our upcoming webinar to learn how to leverage advanced in silico methods to de-risk your molecules and increase your experimental success rates.

Schrödinger Japan Life Sciences User Group Meeting 2026 Event Life Science
  • Jul 30, 2026
Schrödinger Japan Life Sciences User Group Meeting 2026

新規テクノロジーの紹介を始め、実際の創薬プロジェクトでの活用事例を、国内外のユーザー様からのご発表を含めてご紹介します。

Webinars

Standing out in a competitive landscape: The power of structure-based biologics design Webinar Life Science
  • Jul 29, 2026
Standing out in a competitive landscape: The power of structure-based biologics design

Join our upcoming webinar to learn how to leverage advanced in silico methods to de-risk your molecules and increase your experimental success rates.

Biologics modeling for wet lab scientists: Detecting and deprioritizing dead ends before they reach the bench recording Webinar Life Science
  • May 27, 2026
Biologics modeling for wet lab scientists: Detecting and deprioritizing dead ends before they reach the bench recording

Join us to learn how to detect and deprioritize high-risk candidates, effectively discarding developability dead-ends before they ever reach the bench.

Educator’s Week 2026 Webinar Life Science
  • Apr 30, 2026
Educator’s Week 2026

Join us for a series of live webinar presentations from leading educators at top academic institutions, as well as talks by Schrödinger scientists.

Documentation

  • Documentation
Learning Path: Oligonucleotide Modeling

A structured overview of tools and workflows for nucleic acids in drug discovery.

  • Documentation
WaterMap

Efficiently converged MD simulations are run with explicit water molecules, and resultant trajectories are analyzed to cluster hydration sites.

  • Documentation
SiteMap

Identify binding sites, including allosteric binding sites and protein-protein interfaces, and evaluate their druggability.

Tutorials

  • Tutorial
Structure-Based Virtual Screening using Glide

Prepare receptor grids for docking, dock molecules and examine the docked poses.

  • Tutorial
Ligand Binding Pose Generation for FEP+

Generate starting poses for FEP simulations for a series of BACE1 inhibitors using core constrained docking.

  • Tutorial
Homology Modeling of Protein-Ligand Binding Sites with IFD-MD

Create a homology model of TYK2 from JAK3 and including a bound ligand. Compare this model with the crystal structure for TYK2 bound to 4GIH.

Training Videos

Getting Going with Maestro BioLuminate Video Life Science
Getting Going with Maestro BioLuminate

A free video series introducing the basics of using Maestro Bioluminate.

Getting Going with Maestro Video Life Science
Getting Going with Maestro

A free video series introducing the basics of using Maestro.

  • Tutorial
  • Video
The LiveDesign Assistant

Learn how to build and adjust coloring rules, create Freeform and Formula columns, and plot data using the LiveDesign Assistant.

Publications

Case Studies

White Papers

FEP+ Pose Builder — maximizing utility and productivity in FEP simulations White Paper Life Science
  • Jan 29, 2026
FEP+ Pose Builder — maximizing utility and productivity in FEP simulations

FEP+ Pose Builder is a methodological advancement introduced as an integrated feature to drastically enhance accessibility, user-friendliness, and productivity within the FEP+ pipeline.

20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS White Paper Life Science
  • Oct 29, 2024
20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS

Glide has long set the gold standard for commercial molecular docking software due to its robust performance in both binding mode prediction and empirical scoring tasks, ease of use, and tight integration with Schrödinger’s Maestro interface and molecular discovery workflows.

QuickShape screening in the age of ultra-large libraries  White Paper Life Science

Quick Reference Sheets

  • Quick Reference Sheet
Force Field Builder

A one-page guide to calculate missing torsion parameters for ligands using the Force Field Builder panel.

  • Quick Reference Sheet
Ligand Interaction Diagram

A one-page guide to using the Ligand Interaction Diagram for examining ligand-receptor interactions.

  • Quick Reference Sheet
GlideMap

A one-page guide to using the GlideMap GUI for ligand placement guided by experimental density.

1 6 7 8 11

Latest insights from Extrapolations blog

With FEP+, “The Experiment is the Limit.”
With FEP+, “The Experiment is the Limit.”

Over the past century, small molecule drugs have represented the dominant modality in drug research, enabling medical breakthroughs that have saved countless lives.

Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods (FEP)
Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods

The complexity and size of drug candidates has grown in recent years as scientists pursue novel targets once considered undruggable.

Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In Blog
Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In

We recently sat down with Edward Miller, Senior Director of Protein Structure Modeling at Schrödinger, to discuss his experience using AlphaFold models for SBDD.

Training & Resources

Online certification courses

Level up your skill set with hands-on, online molecular modeling courses. These self-paced courses cover a range of scientific topics and include access to Schrödinger software and support.

Free learning resources

Learn how to deploy the technology and best practices of Schrödinger software for your project success. Find training resources, tutorials, quick start guides, videos, and more.