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Structure-based discovery of highly potent dihydroorotate dehydrogenase inhibitors for once-monthly malaria chemoprevention Webinar Life Science
  • Oct 8, 2025
Structure-based discovery of highly potent dihydroorotate dehydrogenase inhibitors for once-monthly malaria chemoprevention

In this webinar, Zhe Nie, medicinal chemist and project leader at Schrödinger, and Margaret Phillips, professor at UT Southwestern Medical School, Dallas, will be in conversation sharing how their teams worked collaboratively towards the discovery of novel DHODH inhibitors.

Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第19回 Webinar Life Science
  • Sep 24, 2025
Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第19回

Computational strategies for discovering and optimizing RNA- and DNA-targeting molecules

Building stable and accurate FEP models for agonist affinity for GPCRs Webinar Life Science
  • Sep 23, 2025
Building stable and accurate FEP models for agonist affinity for GPCRs

In this webinar, Ferran Planas will discuss how the team at Lundbeck routinely uses FEP to predict binding affinities for GPCR agonists.

Innovations in Digital Chemistry: Computational Approaches for Drug & Materials Discovery Webinar Life Science Materials Science
  • Sep 16, 2025
Innovations in Digital Chemistry: Computational Approaches for Drug & Materials Discovery

This webinar series will explore how cutting-edge computational methods are revolutionizing the design and optimization of pharmaceutical drugs, biologics , and advanced materials.

Industry-leading platform to discover and optimize better molecules, faster Webinar Life Science
  • Jul 30, 2025
In silico cryptic binding site detection and prioritization

In this webinar, we will introduce a novel computational workflow that integrates mixed solvent molecular dynamics (MxMD) with SiteMap to reveal and identify cryptic binding sites.

Expand the impact of structural biology on drug design Webinar Life Science
Wee1 Webinar Life Science
  • Jun 25, 2025
How to find a druggable target: A computational perspective

Join us in this beginner-friendly webinar that will introduce you to strategies and best-in-class tools for identifying druggable, technology-enabled targets.

Educator’s Month: Visualizing atomic and molecular orbitals and calculations exploring protonation of nitrogen versus oxygen Webinar Life Science
  • Jun 24, 2025
Educator’s Month: Visualizing atomic and molecular orbitals and calculations exploring protonation of nitrogen versus oxygen

A computational activity exploring the thermodynamics of protonation of nitrogen versus oxygen will also be presented.

Educator’s Month: Targeted Protein Degradation Goes to School: From Bench to Browser with DEGRADATOR Webinar Life Science
  • Jun 11, 2025
Educator’s Month: Targeted Protein Degradation Goes to School: From Bench to Browser with DEGRADATOR

In this talk, I will take you behind the scenes of DEGRADATOR (https://degradator-game.com), the first educational computer game designed to teach students about the ubiquitin-proteasome system and innovative targeted protein degradation therapies, such as PROTACs.

Modelling amorphous solid dispersion (ASD) release mechanisms Webinar Life Science Materials Science
  • Jun 10, 2025
Modelling amorphous solid dispersion (ASD) release mechanisms

In this webinar, AbbVie and Schrödinger will present the results of a study using a combination of Perturbed-Chain Statistical Associating Fluid Theory (PC-SAFT) thermodynamic modeling and molecular simulation to investigate the release mechanism and the occurrence LoR of an ASD formulation.

Educator’s Month: Drug discovery in the classroom Webinar Life Science
  • Jun 9, 2025
Educator’s Month: Drug discovery in the classroom

In this webinar, we’ll discuss the growing significance of in silico protein-ligand docking underscores its importance as a requisite skill for graduating biochemists.

Educator’s Month: Molecular visualization and teaching with Schrodinger for sophomore organic chemistry courses Webinar Life Science
  • Jun 5, 2025
Educator’s Month: Molecular visualization and teaching with Schrodinger for sophomore organic chemistry courses

Physical models for organic chemistry and visualization of molecules in 3D using computers and software (cyberinfrastructure) with hands-on experience are very helpful for students in learning organic chemistry.

Case Studies

Documentation

  • Documentation
Learning Path: Oligonucleotide Modeling

A structured overview of tools and workflows for nucleic acids in drug discovery.

  • Documentation
WaterMap

Efficiently converged MD simulations are run with explicit water molecules, and resultant trajectories are analyzed to cluster hydration sites.

  • Documentation
SiteMap

Identify binding sites, including allosteric binding sites and protein-protein interfaces, and evaluate their druggability.

Events

Festival of Biologics Basel 2025 Event Life Science
  • Sep 30th – Oct 2nd, 2025
Festival of Biologics Basel 2025

Schrödinger is excited to be participating in the Festival of Biologics 2025 conference taking place on September 30th – October 2nd in Basel, Switzerland.

Simulation World Detroit Event Materials Science
  • Oct 1st-2nd, 2025
Simulation World Detroit

Schrödinger is excited to be participating in the Simulation World Detroit conference taking place on October 1st – 2nd in Plymouth, Michigan.

Structure-Based Drug Design Conference 2025 Event Life Science
  • Oct 1st-3rd, 2025
Structure-Based Drug Design Conference 2025

Schrödinger is excited to be participating in the Structure-Based Drug Design Conference 2025 taking place on October 1st – 3rd in Sestri Levante, Italy. 

Training Videos

Getting Going with Maestro BioLuminate Video Life Science
Getting Going with Maestro BioLuminate

A free video series introducing the basics of using Maestro Bioluminate.

Getting Going with Maestro Video Life Science
Getting Going with Maestro

A free video series introducing the basics of using Maestro.

  • Video
Introducing Ligand Designer

An overview of the LigandDesigner workflow, Editing in 2D and 3D, using display options and overlays, and accessing the Admin Panel.

Publications

  • Publication
  • Aug 27, 2025
Knowledge and structure-based drug design of 15-PGDH inhibitors
Dodda LS, et al. J. Med. Chem., 2025
  • Publication
  • Aug 8, 2025
Optimizing drug design by merging generative AI with a physics-based active learning framework
Filella-Merce I, et al. Commun Chem, 2025, 8 , 238
  • Publication
  • Jul 8, 2025
Enabling in-silico Hit Discovery Workflows Targeting RNA with Small Molecules
Chopra, et al. J Chem Inf Model, 2025, 1, 40626899

Quick Reference Sheets

  • Quick Reference Sheet
GlideMap

A one-page guide to using the GlideMap GUI for ligand placement guided by experimental density.

  • Quick Reference Sheet
Synthesis Queue LiveReport

Use Freeform columns to track the status of compounds in a synthesis queue.

  • Quick Reference Sheet
Modeling Queue LiveReport

Learn how to use Freeform columns and an Auto-Update Search to create compound progression workflows.

Tutorials

  • Tutorial
Structure-Based Virtual Screening using Glide

Prepare receptor grids for docking, dock molecules and examine the docked poses.

  • Tutorial
Ligand Binding Pose Prediction for FEP+ using Core-Constrained Docking

Generate starting poses for FEP simulations for a series of BACE1 inhibitors using core constrained docking.

  • Tutorial
Antibody Visualization and Modeling in BioLuminate

Visualize, build, and evaluate antibody models, analyze an antibody for various characteristics, dock an antigen to an antibody.

Webinars

Structure-based discovery of highly potent dihydroorotate dehydrogenase inhibitors for once-monthly malaria chemoprevention Webinar Life Science
  • Oct 8, 2025
Structure-based discovery of highly potent dihydroorotate dehydrogenase inhibitors for once-monthly malaria chemoprevention

In this webinar, Zhe Nie, medicinal chemist and project leader at Schrödinger, and Margaret Phillips, professor at UT Southwestern Medical School, Dallas, will be in conversation sharing how their teams worked collaboratively towards the discovery of novel DHODH inhibitors.

Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第19回 Webinar Life Science
  • Sep 24, 2025
Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第19回

Computational strategies for discovering and optimizing RNA- and DNA-targeting molecules

Building stable and accurate FEP models for agonist affinity for GPCRs Webinar Life Science
  • Sep 23, 2025
Building stable and accurate FEP models for agonist affinity for GPCRs

In this webinar, Ferran Planas will discuss how the team at Lundbeck routinely uses FEP to predict binding affinities for GPCR agonists.

White Papers

20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS White Paper Life Science
  • Oct 29, 2024
20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS

Glide has long set the gold standard for commercial molecular docking software due to its robust performance in both binding mode prediction and empirical scoring tasks, ease of use, and tight integration with Schrödinger’s Maestro interface and molecular discovery workflows.

QuickShape screening in the age of ultra-large libraries  White Paper Life Science
Jaguar for Life Science White Paper Life Science

Latest insights from Extrapolations blog

With FEP+, “The Experiment is the Limit.”
With FEP+, “The Experiment is the Limit.”

Over the past century, small molecule drugs have represented the dominant modality in drug research, enabling medical breakthroughs that have saved countless lives.

Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods (FEP)
Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods

The complexity and size of drug candidates has grown in recent years as scientists pursue novel targets once considered undruggable.

Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In Blog
Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In

We recently sat down with Edward Miller, Senior Director of Protein Structure Modeling at Schrödinger, to discuss his experience using AlphaFold models for SBDD.

Training & Resources

Online certification courses

Level up your skill set with hands-on, online molecular modeling courses. These self-paced courses cover a range of scientific topics and include access to Schrödinger software and support.

Free learning resources

Learn how to deploy the technology and best practices of Schrödinger software for your project success. Find training resources, tutorials, quick start guides, videos, and more.