Background

Resources

Filter

Type
Topic
Product
6th EFMC² Tandem Talks Webinar Life Science
  • Oct 9, 2025
6th EFMC² Tandem Talks

Schrödinger is excited to be participating in the 6th EFMC² Tandem Talks virtual event taking place on October 9th.

Structure-based discovery of highly potent dihydroorotate dehydrogenase inhibitors for once-monthly malaria chemoprevention Webinar Life Science
  • Oct 8, 2025
Structure-based discovery of highly potent dihydroorotate dehydrogenase inhibitors for once-monthly malaria chemoprevention

In this webinar, Zhe Nie, medicinal chemist and project leader at Schrödinger, and Margaret Phillips, professor at UT Southwestern Medical School, Dallas, share in conversation how their teams worked collaboratively towards the discovery of novel DHODH inhibitors.

Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第19回 Webinar Life Science
  • Sep 24, 2025
Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第19回

Computational strategies for discovering and optimizing RNA- and DNA-targeting molecules

Building stable and accurate FEP models for agonist affinity for GPCRs Webinar Life Science
  • Sep 23, 2025
Building stable and accurate FEP models for agonist affinity for GPCRs

In this webinar, Ferran Planas will discuss how the team at Lundbeck routinely uses FEP to predict binding affinities for GPCR agonists.

Innovations in Digital Chemistry: Computational Approaches for Drug & Materials Discovery Webinar Life Science Materials Science
  • Sep 16, 2025
Innovations in Digital Chemistry: Computational Approaches for Drug & Materials Discovery

This webinar series will explore how cutting-edge computational methods are revolutionizing the design and optimization of pharmaceutical drugs, biologics , and advanced materials.

Industry-leading platform to discover and optimize better molecules, faster Webinar Life Science
  • Jul 30, 2025
In silico cryptic binding site detection and prioritization

In this webinar, we will introduce a novel computational workflow that integrates mixed solvent molecular dynamics (MxMD) with SiteMap to reveal and identify cryptic binding sites.

Expand the impact of structural biology on drug design Webinar Life Science
Wee1 Webinar Life Science
  • Jun 25, 2025
How to find a druggable target: A computational perspective

Join us in this beginner-friendly webinar that will introduce you to strategies and best-in-class tools for identifying druggable, technology-enabled targets.

Educator’s Month: Visualizing atomic and molecular orbitals and calculations exploring protonation of nitrogen versus oxygen Webinar Life Science
  • Jun 24, 2025
Educator’s Month: Visualizing atomic and molecular orbitals and calculations exploring protonation of nitrogen versus oxygen

A computational activity exploring the thermodynamics of protonation of nitrogen versus oxygen will also be presented.

Educator’s Month: Targeted Protein Degradation Goes to School: From Bench to Browser with DEGRADATOR Webinar Life Science
  • Jun 11, 2025
Educator’s Month: Targeted Protein Degradation Goes to School: From Bench to Browser with DEGRADATOR

In this talk, I will take you behind the scenes of DEGRADATOR (https://degradator-game.com), the first educational computer game designed to teach students about the ubiquitin-proteasome system and innovative targeted protein degradation therapies, such as PROTACs.

Modelling amorphous solid dispersion (ASD) release mechanisms Webinar Life Science Materials Science
  • Jun 10, 2025
Modelling amorphous solid dispersion (ASD) release mechanisms

In this webinar, AbbVie and Schrödinger will present the results of a study using a combination of Perturbed-Chain Statistical Associating Fluid Theory (PC-SAFT) thermodynamic modeling and molecular simulation to investigate the release mechanism and the occurrence LoR of an ASD formulation.

Educator’s Month: Drug discovery in the classroom Webinar Life Science
  • Jun 9, 2025
Educator’s Month: Drug discovery in the classroom

In this webinar, we’ll discuss the growing significance of in silico protein-ligand docking underscores its importance as a requisite skill for graduating biochemists.

Events

Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第22回 Webinar Life Science
  • Feb 18, 2026
Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第22回

Predictive toxicology solutions: Actionable, structure-based insights to dial-out tox liabilities early

Introducing RetroSynth: Breaking the synthesis bottleneck with AI and physics-based modeling Webinar Life Science
  • Feb 19, 2026
Introducing RetroSynth: Breaking the synthesis bottleneck with AI and physics-based modeling

Join us for the introduction of RetroSynth, Schrödinger’s AI-driven synthesis planning platform. RetroSynth is engineered to accelerate and scale conventional retrosynthesis by harnessing advanced deep learning algorithms.

InventU Sustainable Future Congress 2026 Event Materials Science
  • Feb 25th-26th, 2026
InventU Sustainable Future Congress 2026

Schrödinger is excited to be participating in the InventU Sustainable Future Congress conference taking place on February 25th – 26th in Amsterdam, Netherlands.

Webinars

Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第22回 Webinar Life Science
  • Feb 18, 2026
Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第22回

Predictive toxicology solutions: Actionable, structure-based insights to dial-out tox liabilities early

Introducing RetroSynth: Breaking the synthesis bottleneck with AI and physics-based modeling Webinar Life Science
  • Feb 19, 2026
Introducing RetroSynth: Breaking the synthesis bottleneck with AI and physics-based modeling

Join us for the introduction of RetroSynth, Schrödinger’s AI-driven synthesis planning platform. RetroSynth is engineered to accelerate and scale conventional retrosynthesis by harnessing advanced deep learning algorithms.

Building a biotech: Enabling a successful digital drug discovery program with a connected platform AMER Webinar Life Science
  • Feb 26, 2026
Building a biotech: Enabling a successful digital drug discovery program with a connected platform AMER

Join us to see how this powerful solution can accelerate your DMTA cycles and enable your teams – this isn’t about complex simulations, it’s about giving your team the tools they need to make better decisions, faster.

Documentation

  • Documentation
Learning Path: Oligonucleotide Modeling

A structured overview of tools and workflows for nucleic acids in drug discovery.

  • Documentation
WaterMap

Efficiently converged MD simulations are run with explicit water molecules, and resultant trajectories are analyzed to cluster hydration sites.

  • Documentation
SiteMap

Identify binding sites, including allosteric binding sites and protein-protein interfaces, and evaluate their druggability.

Tutorials

  • Tutorial
Structure-Based Virtual Screening using Glide

Prepare receptor grids for docking, dock molecules and examine the docked poses.

  • Tutorial
Ligand Binding Pose Generation for FEP+

Generate starting poses for FEP simulations for a series of BACE1 inhibitors using core constrained docking.

  • Tutorial
Homology Modeling of Protein-Ligand Binding Sites with IFD-MD

Create a homology model of TYK2 from JAK3 and including a bound ligand. Compare this model with the crystal structure for TYK2 bound to 4GIH.

Training Videos

Getting Going with Maestro BioLuminate Video Life Science
Getting Going with Maestro BioLuminate

A free video series introducing the basics of using Maestro Bioluminate.

Getting Going with Maestro Video Life Science
Getting Going with Maestro

A free video series introducing the basics of using Maestro.

  • Video
Introducing Ligand Designer

An overview of the LigandDesigner workflow, Editing in 2D and 3D, using display options and overlays, and accessing the Admin Panel.

Publications

Case Studies

White Papers

FEP+ Pose Builder — maximizing utility and productivity in FEP simulations White Paper Life Science
  • Jan 29, 2026
FEP+ Pose Builder — maximizing utility and productivity in FEP simulations

FEP+ Pose Builder is a methodological advancement introduced as an integrated feature to drastically enhance accessibility, user-friendliness, and productivity within the FEP+ pipeline.

20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS White Paper Life Science
  • Oct 29, 2024
20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS

Glide has long set the gold standard for commercial molecular docking software due to its robust performance in both binding mode prediction and empirical scoring tasks, ease of use, and tight integration with Schrödinger’s Maestro interface and molecular discovery workflows.

QuickShape screening in the age of ultra-large libraries  White Paper Life Science

Quick Reference Sheets

  • Quick Reference Sheet
Force Field Builder

A one-page guide to calculate missing torsion parameters for ligands using the Force Field Builder panel.

  • Quick Reference Sheet
Ligand Interaction Diagram

A one-page guide to using the Ligand Interaction Diagram for examining ligand-receptor interactions.

  • Quick Reference Sheet
GlideMap

A one-page guide to using the GlideMap GUI for ligand placement guided by experimental density.

Latest insights from Extrapolations blog

With FEP+, “The Experiment is the Limit.”
With FEP+, “The Experiment is the Limit.”

Over the past century, small molecule drugs have represented the dominant modality in drug research, enabling medical breakthroughs that have saved countless lives.

Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods (FEP)
Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods

The complexity and size of drug candidates has grown in recent years as scientists pursue novel targets once considered undruggable.

Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In Blog
Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In

We recently sat down with Edward Miller, Senior Director of Protein Structure Modeling at Schrödinger, to discuss his experience using AlphaFold models for SBDD.

Training & Resources

Online certification courses

Level up your skill set with hands-on, online molecular modeling courses. These self-paced courses cover a range of scientific topics and include access to Schrödinger software and support.

Free learning resources

Learn how to deploy the technology and best practices of Schrödinger software for your project success. Find training resources, tutorials, quick start guides, videos, and more.