INTERPHEX 2024

Conference

INTERPHEX 2024

CalendarDate & Time
  • April 16th-18th, 2024
LocationLocation
  • New York, New York

Schrödinger is excited to be participating in INTERPHEX 2024 taking place on April 16th – 18th at the Javits Center in New York City, New York. Join us for a presentation by Shiva Sekharan, Senior Director at Schrödinger, titled “A highly accurate, reliable, and efficient CSP and FEP+ workflow for small molecule drug formulation.”

Speaker: Shiva Sekharan, Senior Director
Date/Time: April 18th | 11:45am
Abstract: Early assessment of crystal polymorphism and thermodynamic solubility continues to be elusive for drug discovery and development despite its critical importance especially for the ever-increasing fraction of poorly soluble drug candidates. We have developed a crystal structure prediction (CSP) method that combines a novel systematic crystal packing search algorithm and a hierarchical energy ranking protocol to predict crystal polymorphs. The predictive power of our CSP is validated on a large and diverse dataset including 65 molecules with 135 experimentally found polymorphic forms to complement experimental polymorph screening workflows. The physics-based free energy perturbation (FEP+) approach for computing thermodynamic aqueous solubility is assessed across a diverse chemical space spanning several pharmaceutically relevant compounds in the literature. The high accuracy, reliability, and efficiency of our CSP and FEP+ methods with large scale validations position it for routine polymorph screening and solubility prediction in drug substance and drug product development process.

2024 AOCS Annual Meeting & Expo

Conference

2024 AOCS Annual Meeting & Expo

CalendarDate & Time
  • April 28th – May 1st, 2024
LocationLocation
  • Montréal, Québec, Canada

Schrödinger is excited to be participating in the 2024 AOCS Annual Meeting & Expo taking place on April 28th – May 1st in Montréal, Québec, Canada. Join us for a presentation by Ben Coscia, Principal Scientist at Schrödinger, titled “Molecular modeling of a hair fiber surface by coarse-grained simulation.” Stop by booth 916 to speak with Schrödinger scientists.

Date/Time: April 29 | 11:15 AM – 11:35 AM EDT

Speaker: Ben Coscia, Principal Scientist, Schrödinger

Abstract: Further understanding of the physical properties of the hair surface and its interactions with commonly used ingredients would help to drive new development for hair care products. Molecular simulation can provide an accurate predictive model on the outer layer of the hair to help researchers and engineers understand the fundamental physics at molecular level.1,2 In this study, we have built a MARTINI coarse-grained (CG) model focusing on the description of 18-methyl eicosanoic acid (18-MEA). The CG model was derived from an all-atom model but it overcomes the size limits of the all-atom model.3 We first used the model to characterize the hair surface to understand the distribution of 18-MEA patches. Then the model was used to virtual test the interaction of ingredients on the hair surface. Through modeling of grease molecules and shampoo surfactants on the F-layer of the hair surface, the in-situ cleaning and conditioning process are revealed at molecular scale resolution, which can be correlated to the processes of cleaning and conditioning when washing macroscopically.The MARTINI CG model provides an opportunity to understand the hair surface under different conditions. The unique mechanistic insight of these simulations can help enrich the knowledge of the functioning of the products and help optimize the product performance.

構造に基づいた抗体エンジニアリングの最前線: Epitope Mapping、Cryo-EMとin silico技術のインタープレイ

Webinar

構造に基づいた抗体エンジニアリングの最前線: Epitope Mapping、Cryo-EMとin silico技術のインタープレイ

CalendarDate & Time
  • April 24th, 2024
  • 4:00PM
LocationLocation
  • Virtual

この度、シュレーディンガー株式会社はiBody株式会社(本社: 愛知県名古屋市、代表取締役 CEO:天草 )と共に、オンラインセミナーを開催します。

icon time ⽇本時間4:00PM – 5:00PM
構造に基づいた抗体エンジニアリングの最前線: Epitope Mapping、Cryo-EMとin silico技術のインタープレイ

シュレーディンガー株式会社 シニア プリンシパル サイエンティスト 市原 収

【セミナー概要】
FEP 法によるリガンド結合エネルギー予測は小分子創薬の分野では事実上のin silico アッセイとして広く活用され、抗体エンジニアリングにおいては、複合体構造が既知なら、アミノ酸配列改変による抗体のアフィニティ変化の予測が可能となります。しかし、抗体医薬開発では複合体構造が解かれていない場合が多く、in silico 複合体構造予測法の開発が強く求められています。
本セミナーでは、分子動力学法と実験データを組み合わせたDisordered エピトープや長いCDR H3 ループを持つ抗体抗原複合体構造の予測、さらに、Chemical Cross-Linking などの実験的エピトープマッピングデータや、NegativeStain レベルの低分解能Cryo-EM データの活用方法についても紹介します。

【セミナー形式】
Zoom webinarを使⽤したオンライン形式

【お申込み⽅法】
参加のお申し込みはこちらから▼ iBody株式会社の申込サイトに遷移します。
https://x.gd/3vBzI

ご質問、ご不明な点がございましたら下記までお問い合わせください。
事務局
iBody 株式会社
464-0858 愛知県名古屋市千種区千種2-22-8 名古屋医工連携インキュベータ417
TEL052-753-8654

Introducing PyMOL 3: Bring your biochemistry to life with 3D molecular visualization and movie making

Webinar

Introducing PyMOL 3: Bring your biochemistry to life with 3D molecular visualization and movie making

CalendarDate & Time
  • April 25th, 2024
  • 8:00 AM PT / 11:00 AM ET / 4:00 PM GMT / 5:00 PM CET
LocationLocation
  • Virtual

Join us for an introduction to PyMOL 3, the latest advancement in 3D molecular visualization and animation software.

PyMOL has long been the preferred choice of hundreds of thousands of scientists worldwide for its unparalleled visualization quality, speed, and flexibility.

With PyMOL 3, we’re taking molecular visualization to new heights – empowering scientists, educators, marketers, and communicators to bring their science to life.

Key Highlights:

  • Watch a live demonstration of PyMOL 3 and Q&A hosted by the developers
  • Explore the enhancements to the graphical user interface
  • Learn how to load in a structure, make changes to the styling, and export a ray traced image
  • Produce a simple movie by creating and organizing scenes using the new Scenes Panel and Timeline
  • See examples of stunning graphics and videos created using PyMOL 3

Who Should Attend:

  • Scientists and researchers looking to enhance their molecular visualization and movie-making capabilities
  • Educators seeking to create engaging animations and illustrations for teaching
  • Marketers and communicators aiming to elevate their presentations and materials with stunning visuals
  • Anyone interested in exploring the cutting-edge features of PyMOL 3 and its applications
icon time 11:00 AM – 12:00 PM EST (1 Hour)

Introducing PyMOL 3: Bring your biochemistry to life with 3D molecular visualization and movie making

Our Speakers

Thomas Stewart

Developer II, PyMOL, Schrödinger

Thomas Stewart is a developer and product manager on the PyMOL team at Schrödinger, where he has worked since 2020. His recent efforts have focused on the implementation of several new features offered in PyMOL 3, including the improved graphical user interface (GUI), the scenes panel, and the presets panel. He obtained his master’s degree in Biomedical Engineering from the University of Michigan.

Jarrett Johnson, Ph.D.

Senior Developer II, PyMOL, Schrödinger

Jarrett Johnson is the principal developer and technical lead for the PyMOL project. He joined Schrödinger in 2018, after a decade of experience as a PyMOL advocate and user. Jarrett received his Ph.D. from the University of Michigan where he studied and authored computational protein structure prediction and design algorithms. His major contributions to PyMOL include multiple-level undo and the implementation of the Timeline, the new movie maker introduced in version 3.0.

PEGS Boston 2024

Conference

PEGS Boston 2024

CalendarDate & Time
  • May 13th-17th, 2024
LocationLocation
  • Boston, Massachusetts

Schrödinger is excited to be participating in the PEGS Boston 2024 conference taking place on May 13th – 17th in Boston, Massachusetts. Join us for a presentation by Cindy Gerson, Senior Lead Product Manager of Enterprise Informatics at Schrödinger, titled “Improving and expediting biologics discovery with a centralized, collaborative informatics platform.” Stop by our booth to speak with Schrödinger scientists.

Speaker:
Cindy Gerson, Senior Lead Product Manager

Date/Time:
May 14 | 1:40 PM – 2:10 PM

Abstract: 
This presentation will discuss how LiveDesign, Schrödinger’s enterprise informatics platform, has been developed to enable biologics workflows. LiveDesign expedites and improves decision making by 1) uniting all in vitro and in silico data and metadata in one centralized hub, 2) supplying tools for decision tracking and streamlined communication, 3) integrating and democratizing computational modeling execution, delivery, and 3D visualization, and 4) providing an agnostic snap-in/snap-out framework for flexible evolution of workflows.

Educator’s Week 2024

Hybrid event

Educator’s Week 2024

CalendarDate & Time
  • May 28th-31st, 2024
LocationLocation
  • New York, New York
Register

Bring Educational Technology Into the Science Classroom

While science curricula are ever-evolving, many lines of evidence show that modernizing teaching tools and methodologies can tremendously benefit students.

Join us for a series of live webinar presentations from leading educators at top academic institutions, as well as talks by Schrödinger scientists.

All registrants will receive recordings of the talks once the event concludes.

Who Should Attend

  • Chemistry and biology professors (undergraduate, graduate)
  • High school chemistry and biology teachers (college prep, honors, AB/IB level)
  • Chemistry and biology postdoctoral scholars or graduate students who are interested in teaching

About the Event

Schrödinger’s Educator’s Week is connecting educators from all over the world to discuss the growing role of educational technology in the classroom and integrating computational molecular modeling into modern science curriculums.

May 28-30, 2024 (VIRTUAL)

12:00 PM–2:00 PM ET

  • Free, virtual conference with live presentations

May 31, 2024 (IN-PERSON)

10:00 AM–1:00 PM ET

  • Free, hands-on workshops for Educators at the Schrödinger NYC headquarters – Limited spots!
  • Breakfast and lunch will be provided

Agenda

22nd European User Group Meeting 2024

22nd European User Group Meeting 2024

CalendarDate & Time
  • June 11th-13th, 2024
LocationLocation
  • Fotografiska Museum – Stockholm, Sweden

We are pleased to invite you to the 22nd Schrödinger European User Group Meeting on June 11-13, 2024 in Stockholm, Sweden

This in-person event will bring together a dedicated group of Schrödinger team members and customers from across Europe. We are preparing an interactive program including scientific presentations, workshops, and panel discussions, as well as ample opportunities for networking during breaks and evening social events. You will have the chance to enjoy the Fotografiska Museum in Stockholm alongside experiencing the city with a boat trip.

Agenda Highlights

  • User talks highlighting applications of computational methods for drug discovery of small molecules and biological therapeutics
  • Schrödinger presentations and hands-on workshops outlining the latest developments of our molecular design platform
  • Interactive panel discussions
  • Opportunities for 1:1 meetings
  • Networking dinners and receptions

We are looking forward to this opportunity to learn from each other, discuss the state of our field, and reflect on the common goals in our community.

Meeting Details

The event starts on Tuesday at 11:00 and ends on Thursday at 12:30 followed by lunch.

Day 1: From Traditional Modeling to Augmented Intelligence

  • Combining physics-based modeling and machine learning
  • Large-scale chemical space exploration
  • Comp Chem/Med Chem joint presentations
  • Workshop: Prioritizing DLK inhibitors for potency, selectivity, and brain-penetration with the Schrödinger platform

Day 2: From Simple Systems to New Modalities

  • Recent advances in modeling of new modalities
    • Target enablement
    • Antibodies
    • Peptides
    • Bifunctional degraders
    • Other modalities
  • Workshop: Revolutionising biologics: A journey into LiveDesign for innovative discovery

Day 3: Big Transitions Require Change Management & Schrödinger Platform and Scientific Roadmap

SAMPE 2024

Conference

SAMPE 2024

CalendarDate & Time
  • May 21st-22nd, 2024
LocationLocation
  • Long Beach, California

Schrödinger is excited to be participating in the SAMPE 2024 conference taking place on May 21st – 22nd in Long Beach, California. Stop by booth C40 to speak with Schrödinger scientists.

Institute of Food Technologists Conference

Conference

Institute of Food Technologists Conference

CalendarDate & Time
  • July 14th-17th, 2024
LocationLocation
  • Chicago, Illinois

Schrödinger is excited to be participating in the Institute of Food Technologists Conference taking place on July 14th – 17th in Chicago, Illinois. Join us for a presentation by Jeffrey Sanders, Product Manager of Consumer Goods at Schrödinger, titled “Characterizing Protein-Based Ingredients From the Bottom Up.” Stop by booth #2125 to speak with Schrödinger scientists.

Speaker:
Jeffrey Sanders, Product Manager of Consumer Goods

Abstract:
The rise of alternative proteins in the food industry has brought several challenges in processing, taste, and price parity. While there have been some successes, consumption of alternative protein-based foods represents a small fraction overall. One of the reasons for this is the lack of analytical knowledge about protein sources and their physical and chemical properties that influence an overall food product and its perception by the consumer. Top down approaches to understanding these new food materials has limited their applicability. Predictive modeling, including physics-based modeling and machine learning, presents an opportunity to provide unique insight to how food ingredients behave, in a soft-matter physics framework. In this talk, the current state of the art in physics-based modeling of alternative proteins will be presented alongside case studies relevant protein-ingredients interactions at the molecular level. This information can help food scientists make more informed decisions when formulating new foods and beverages and help them understand the impact of replacing traditional protein sources with alternatives ones.

ACS Spring 2024

Conference

ACS Spring 2024

CalendarDate & Time
  • March 17th-21st, 2024
LocationLocation
  • New Orleans, Louisiana

Schrödinger is excited to be participating in the ACS Spring 2024 conference taking place on March 17th – 21st in New Orleans, Louisiana. Stop by our booth to speak with Schrödinger scientists.

icon time 11:30am, March 19
icon location Hall D, Expo Theater
Workshop 1: Expanding the Experimentalist’s Toolkit: Getting Started with FEP+ Calculations

Abigail L. Emtage, Principal Scientist I, Education Specialist, Schrödinger
Computational methods can help drive forward drug discovery campaigns through prediction of binding affinities of small molecules to protein targets. Free energy perturbation (FEP) methods, such as Schrödinger’s FEP+, can provide accurate predictions for binding affinities in drug design. Historically, learning advanced molecular modeling techniques has been difficult due to the often steep computational chemistry learning curve, limited training opportunities, and a lack of access to both industry-standard software packages and compute resources. In this workshop, we will provide an introduction to Schrödinger’s FEP+ methodology, and highlight modeling approaches that have been successful both in Schrödinger’s internal programs and collaborative drug discovery campaigns. We will additionally demonstrate how our Schrödinger online certification course Free Energy Calculation for Drug Design with FEP+ can simultaneously upskill computational researchers and the medicinal chemistry workforce by providing hands-on exposure to our FEP+ workflows and best practices via virtual cluster software access.

icon time 1:30pm, March 19
icon location Hall D, Expo Theater
Workshop 2: Empowering Exploration: A Workshop on Molecular Modeling for Materials Science and Chemistry for Non-Experts and Experimentalists

Katie Dahlquist, Senior Scientist I, Education Specialist, Schrödinger
Atomistic simulation has transitioned from being optional to indispensable in materials science, chemistry, and engineering. Applied molecular modeling can drive or supplement a research project – accelerating discovery, minimizing the need for costly experiments, and providing atomic scale insights. As simulation becomes the norm in R&D, there is increased demand for scientists with molecular modeling capabilities. In this workshop, we will showcase Schrödinger’s Materials Science Maestro interface – a single platform for atomistic simulation – with capabilities in quantum mechanics, molecular dynamics, and machine learning. We will present workflows for structure building and property prediction across several materials science application areas, including catalysis, polymeric materials, pharmaceutical formulations, and battery materials. Attendees will walk away with an understanding of how new users can take advantage of Schrödinger’s offering for simulation and modeling, as well as practical knowledge about how they can get started today.

icon time 2:00pm, March 18
icon location Hall B, Room 3
Accurate scoring for virtual screening campaigns: The transformative impact of absolute binding free energy calculations in hit discovery

Steven Jerome, Senior Director, Schrödinger

icon time 9:25am, March 19
icon location Hall B, Room 7
Applying and learning molecular modeling tools for designing battery materials

Katie Dahlquist, Senior Scientist I, Education Specialist, Schrödinger

icon time 5:15pm, March 19
icon location R03
Free energy calculations for protein-protein binding, pH sensing, functional response modeling and more

Lingle Wang, Senior Vice President, Schrödinger

icon time 11:20am, March 20
icon location Room 355
Accelerated in silico discovery of SGR-1505: A potent MALT1 allosteric inhibitor for the treatment of mature B-cell malignancies

Zhe Nie, Executive Director, Schrödinger

icon time 8:00am, March 21
icon location Room 225
Modeling nucleation and growth of solid electrolyte interphase in Lithium-ion batteries using Schrödinger SEI Simulation Workflow

Manav Bhati, Garvit Agarwal, Subodh Tiwari, Mayank Misra, Shaun Kwak, Andrea R. Browning, and Mathew D. Halls, Schrödinger

icon time 8:00am, March 21
icon location Room 2
Modeling phosphorescent OLEDs with ligand field molecular mechanics

Owen Madin, Senior Scientist II, Schrödinger

The Battery Show

Conference

The Battery Show

CalendarDate & Time
  • October 7th-10th, 2024
LocationLocation
  • Detroit, Michigan

Schrödinger is excited to be participating in the The Battery Show conference taking place on October 7th – 10th in Detroit, Michigan. Stop by booth 6546 to speak with Schrödinger scientists.

MWSCC Teamworks

Conference

MWSCC Teamworks

CalendarDate & Time
  • March 19th, 2024
LocationLocation
  • Chicago, Illinois

Schrödinger is excited to be participating in the MWSCC Teamworks conference taking place on March 19th in Chicago, Illinois. Stop by booth 426 to speak with Schrödinger scientists.