Jaguar for Life Science

Quantum mechanics solution for rapid and accurate prediction of molecular structures and properties

Background Image Jaguar for Life Science
 

Structure prediction of molecular systems at unmatched speed

Jaguar is a well-validated, robust, high-performance quantum mechanics package that applies rapid ab initio calculations to accurately predict structures and compute molecular properties of novel molecular systems of all sizes.

Key Capabilities

Access a diversity of DFT functionals

With analytic second derivatives and dispersion corrections

Model solvent effects

Model important solvent effects by a variety of implicit solvation models

Construct reaction coordinates

Between reactants, products, and transition states; generate potential energy surfaces with respect to variations in internal coordinates

Use automated workflows for advanced analysis

Including pKa prediction, conformationally-averaged VCD and ECD spectroscopy, tautomer generation and ranking, and heat of formation

Generate publication-quality 3D surfaces

Including molecular orbitals, electrostatic potential projected on isodensity, spin density, and non-covalent interactions

Easily scale to different molecular sizes

Which facilitates the study of large, challenging real-world systems

Case studies & webinars

Discover how Schrödinger technology is being used to solve real-world research challenges.

Life Science Webinar

Chinese Webinar: 薛定谔中文讲座:DLK在计算机辅助药物设计中的案例研究 ,网络讲座录制 计算机驱动用于治疗神经退行性疾病的高效、高选择性和穿透脑血屏障的DLK抑制剂的发现

双亮氨酸拉链激酶(DLK)(又名MAP3K12)是混合系谱激酶(MLK)家族的成员,它包含一个N-末端激酶结构域,后面跟着两个亮氨酸拉链结构域以及一个富含甘氨酸/丝氨酸/脯氨酸的C-末端结构域。它主要在神经元细胞中表达,特别是在神经元的突触末端和轴突中

Life Science Webinar

In silico enabled discovery of KAI-11101, a potent, selective, and brain-penetrant DLK inhibitor for the treatment of neurodegenerative diseases

In this webinar, we detail the program led by Schrödinger Therapeutics Group to discover a novel, potent, selective, and brain-penetrant DLK inhibitor (KAI-11101).

Life Science Webinar

Beyond the Lab: Unleashing the Potential of In Silico Modeling in Drug Product Formulation

In this webinar, we explore Schrödinger’s leading molecular modeling and machine learning platform.

Life Science Case Study

High precision, computationally-guided discovery of highly selective Wee1 inhibitors for the treatment of solid tumors

Life Science Case Study

Schrödinger solutions for small molecule protonation state enumeration and pKa prediction

Life Science Webinar

Into the Clinic: Developing potent and selective kinase inhibitors using at-scale FEP and protein FEP: a Wee1 case study

In this webinar, we discuss the discovery of novel Wee1 kinase inhibitors using a strategy that couples ligand free energy calculations with protein free energy calculations to simultaneously find promising chemical matter and de-risk for off-target liabilities.

Life Science Case Study

Morphic Therapeutic leverages digital chemistry strategy to design a novel small molecule inhibitor of α4β7 integrin

Life Science Webinar

Resolving Absolute Stereochemistry in Early Drug Discovery with VCD

Determining the absolute configuration of small molecules is important early in the drug discovery process.

Life Science Webinar

Rationalizing Non-covalent Interactions with Density Functional Theory

Jaguar Datasheet

Learn more about the technical details of Jaguar and its applications.

Documentation & Tutorials

Get answers to common questions and learn best practices for using Schrödinger’s software.

Life Science Documentation

Jaguar

A well-validated, robust, high-performance quantum mechanics package.

Life Science Tutorial

Computational Ellipsometry

Learn how to compute the refractive index and extinction coefficient of systems of organic optoelectronics.

Life Science Tutorial

NMR Spectra Prediction

Learn to predict nuclear magnetic resonance (NMR) spectra.

Life Science Tutorial

pKa Predictions with Jaguar pKa

Predict the pKa of organic molecules with more than one acidic functional group.

Life Science Tutorial

Introduction to Geometry Optimizations, Functionals and Basis Sets

Perform geometry optimizations on simple organic molecules and learn basics regarding functionals and basis sets.

Life Science Tutorial

Locating Transition States: Part 1

Locate a transition state (TS) for a typical organometallic reaction via three methods: standard TS search, coordinate scan, and AutoTS.

Life Science Tutorial

Locating Transition States: Part 2

Demonstrate how to use a known transition state to locate the transition state of a similar reaction.

Life Science Tutorial

pKa Prediction with Macro-pKa

Learn how to carry out DFT-based pKa calculations with the Macro-pKa workflow and how to analyze the results it produces.

Life Science Tutorial

Vibrational Circular Dichroism (VCD)

Learn to perform vibrational circular dichroism (VCD) calculations.

Life Science Tutorial

Computing Atomic Charges

Calculate atomic partial charges and compare different methods for determining charges.

Related Products

Learn more about the related computational technologies available to progress your research projects.

Virtual Cluster

Secure, scalable environment for running simulations on the cloud

Maestro

Complete modeling environment for your molecular discovery

Macro-pKa

Accurate, physics-based modeling of the aqueous ionization and speciation behavior of small molecules

AutoTS

Automatic workflow for locating transition states for elementary reactions

Jaguar Spectroscopy

Conformationally-dependent spectroscopic characterization based on quantum mechanics calculations

Publications

Browse the list of peer-reviewed publications using Schrödinger technology in related application areas.

Materials Science Publication

Screening Antioxidant Ingredients Using Quantum Mechanics and Machine Learning

Materials Science Publication

Band Gap and Reorganization Energy Prediction of Conducting Polymers by the Integration of Machine Learning and Density Functional Theory

Materials Science Publication

Charge Transport Regulation in Solution-Processed OLEDs by Indenocarbazole–Triazine Bipolar Host Copolymers

Life Science Publication

In silico enabled discovery of KAI-11101, a preclinical DLK inhibitor for the treatment of neurodegenerative disease and neuronal injury

Life Science Publication

Calculating apparent pKa values of ionizable lipids in lipid nanoparticles

Materials Science Publication

Catalytic Intermolecular Asymmetric [2π + 2σ] Cycloadditions of Bicyclo[1.1.0]butanes: Practical Synthesis of Enantioenriched Highly Substituted Bicyclo[2.1.1]hexanes

Materials Science Publication

Investigation of the atomic layer etching mechanism for Al2O3 using hexafluoroacetylacetone and H2 plasma

Materials Science Publication

Olefination with sulfonyl halides and esters:Mechanistic DFT and experimental studies, andcomparison with reactivity of phosphonates

Materials Science Publication

Low pKa Phosphido-Boranes Capture Carbon Dioxide with Exceptional Strength: DFT Predictions Followed by Experimental Validation

Materials Science Publication

Chemical Nature and Control of High-k Dielectric/III-V Interfaces

Training & Resources

Online certification courses

Level up your skill set with hands-on, online molecular modeling courses. These self-paced courses cover a range of scientific topics and include access to Schrödinger software and support.

Tutorials

Learn how to deploy the technology and best practices of Schrödinger software for your project success. Find training resources, tutorials, quick start guides, videos, and more.