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  • Tutorial
Introduction to MD Simulations with Desmond

Prepare, run, and perform simple analysis on an all-atom MD simulation with Desmond.

Antibody Humanization Guided by Computational Modeling Webinar Life Science
Life Science: Desmond Webinar Life Science
  • Jun 16, 2022
Desmond分子动力学模拟 | Molecular Dynamics Simulations

Desmond分子动力学模拟”培训将演示Desmond分子动力学工作流程,其中包括

Introducing a new in silico workflow for efficient and automated macrocycle design White Paper Life Science
Enzymes by Design: Structure-based Methods for Modeling Enzymes Webinar Life Science
  • Jul 8, 2020
Enzymes by Design: Structure-based Methods for Modeling Enzymes

An overview of how the Schrödinger technology can be used to optimize enzymes using structure-based rational design.

  • Quick Reference Sheet
MxMD

Setting up and analyzing mixed-solvent MD simulations in a nutshell.

  • Tutorial
Exploring Protein Binding Sites with Mixed-Solvent Molecular Dynamics

Identify and characterize binding sites with mixed solvent molecular dynamics.

  • Documentation
Learning Path: Computational Target Analysis

A structured overview of tools and workflows for analyzing and understanding the behavior of target proteins.

  • Tutorial
Protein pKa Prediction with Constant pH Molecular Dynamics

Determine pKa values and protonation states for protein residues.

  • Tutorial
Thin Plane Shear

Learn to calculate the thin plane shear viscosity and friction coefficient.

Schrödinger Software 2024-3 新機能紹介ウェビナーアーカイブ配信 Webinar Life Science
  • Oct 15, 2024
Schrödinger Software 2024-3 新機能紹介ウェビナーアーカイブ配信

SEPT 3, 2024 | この度、最新版となる2024-3をリリースいたしました。本ウェビナーでは、主要な新機能についてご紹介いたします。

Case Studies

Documentation

  • Documentation
Documentation

Comprehensive reference documentation covering panels and workflows.

  • Documentation
Learning Path: Computational Structure Prediction

A structured overview of tools and workflows for predicting biomacromolecular structures in whole or in part.

  • Documentation
Learning Path: Virtual Screening

A structured overview of how to construct a virtual screening pipeline.

Events

Display Week 2025 Event Life Science
  • May 11th-16th, 2025
Display Week 2025

Schrödinger is excited to be participating in the Display Week 2025 conference taking place on May 11th – 16th in San Jose, California.

Spring Pharmaceutical Synchrotron X-ray Powder Diffraction Workshop Event Materials Science
  • May 12th-13th, 2025
Spring Pharmaceutical Synchrotron X-ray Powder Diffraction Workshop

Schrödinger is excited to be participating in the Spring Pharmaceutical Synchrotron X-Ray Powder Diffraction workshop taking place on May 12th – 13th in Lemont, Illinois.

Computational insights into polymer excipient selection for amorphous solid dispersions Webinar Life Science Materials Science
  • May 14, 2025
Computational insights into polymer excipient selection for amorphous solid dispersions

In this webinar, we will highlight how molecular models can aid our ability to screen through standard polymer excipients for target lists to push into lab testing.

Product Videos

Getting Going with Maestro BioLuminate Video Life Science
Getting Going with Maestro BioLuminate

A free video series introducing the basics of using Maestro Bioluminate.

Getting Going with Maestro Video Life Science
Getting Going with Maestro

A free video series introducing the basics of using Maestro.

A Sneak Peek into Renumbering Residues and the Project Table in BioLuminate Video Life Science
A Sneak Peek into Renumbering Residues and the Project Table in BioLuminate

The sixth video in the Getting Going with Maestro BioLuminate Video Series: renaming chains and residues, the Project Table.

Publications

  • Publication
  • Apr 18, 2025
Enabling in-silico Hit Discovery Workflows Targeting RNA with Small Molecules
Chopra, et al. Theoretical and Computational Chemistry, 2025, 1, Preprint
  • Publication
  • Apr 17, 2025
Active Learning FEP: Impact on Performance of AL Protocol and Chemical Diversity
Lonsdale, et al. Journal of Chemical Theory and Computation, 2025

Quick Reference Sheets

  • Quick Reference Sheet
Structure Reliability Report

A one-page guide to understanding the outputs of the Structure Reliability Report.

  • Quick Reference Sheet
CovDock

A one-page guide to specifying custom reactions for covalent docking.

  • Quick Reference Sheet
MxMD

Setting up and analyzing mixed-solvent MD simulations in a nutshell.

Tutorials

  • Tutorial
Structure-Based Virtual Screening using Glide

Prepare receptor grids for docking, dock molecules and examine the docked poses.

  • Tutorial
Ligand Binding Pose Prediction for FEP+ using Core-Constrained Docking

Generate starting poses for FEP simulations for a series of BACE1 inhibitors using core constrained docking.

  • Tutorial
Antibody Visualization and Modeling in BioLuminate

Visualize, build, and evaluate antibody models, analyze an antibody for various characteristics, dock an antigen to an antibody.

Webinars

Advancing drug discovery programs with machine learning-enhanced de novo design Webinar Life Science
  • May 21, 2025
Advancing drug discovery programs with machine learning-enhanced de novo design

In this webinar, we will demonstrate how large-scale de novo design workflows in Schrödinger’s AutoDesigner, combined with rigorous free energy-based scoring methods, have been applied to several recent programs to overcome critical design challenges. 

Computational insights into polymer excipient selection for amorphous solid dispersions Webinar Life Science Materials Science
  • May 14, 2025
Computational insights into polymer excipient selection for amorphous solid dispersions

In this webinar, we will highlight how molecular models can aid our ability to screen through standard polymer excipients for target lists to push into lab testing.

Schrödinger デジタル創薬セミナー: Into the Clinic~計算化学がもたらす創薬プロセスの変貌~第17回 Webinar Life Science

White Papers

20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS White Paper Life Science
  • Oct 29, 2024
20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS

Glide has long set the gold standard for commercial molecular docking software due to its robust performance in both binding mode prediction and empirical scoring tasks, ease of use, and tight integration with Schrödinger’s Maestro interface and molecular discovery workflows.

QuickShape screening in the age of ultra-large libraries  White Paper Life Science
Jaguar for Life Science White Paper Life Science

Latest insights from Extrapolations blog

With FEP+, “The Experiment is the Limit.”
With FEP+, “The Experiment is the Limit.”

Over the past century, small molecule drugs have represented the dominant modality in drug research, enabling medical breakthroughs that have saved countless lives.

Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods (FEP)
Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods

The complexity and size of drug candidates has grown in recent years as scientists pursue novel targets once considered undruggable.

Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In Blog
Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In

We recently sat down with Edward Miller, Senior Director of Protein Structure Modeling at Schrödinger, to discuss his experience using AlphaFold models for SBDD.

Training & Resources

Online certification courses

Level up your skill set with hands-on, online molecular modeling courses. These self-paced courses cover a range of scientific topics and include access to Schrödinger software and support.

Free learning resources

Learn how to deploy the technology and best practices of Schrödinger software for your project success. Find training resources, tutorials, quick start guides, videos, and more.