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  • Tutorial
Modeling Receptor Binding in an Olfactory Protein

Learn how to prepare structures for docking and create a protein mutation by modeling an olfactory receptor.

  • Tutorial
Exploring Protein Binding Sites with Mixed-Solvent Molecular Dynamics

Identify and characterize binding sites with mixed solvent molecular dynamics.

  • Tutorial
Crystal Structure Prediction

Learn to perform a crystal structure prediction workflow.

  • Tutorial
Introduction to T-Cell Receptor Modeling with BioLuminate

Structure preparation, visualization and analysis of key interactions in the TCR-peptide-MHC complex.

  • Tutorial
Protein pKa Prediction with Constant pH Molecular Dynamics

Determine pKa values and protonation states for protein residues.

  • Tutorial
Introduction to Protein Thermostability Prediction using Protein FEP+

Increase protein thermostability by filling a buried cavity through mutation with protein FEP+.

  • Tutorial
Automated Martini Fitting for Coarse-Grained Simulations

Use the Coarse-Grained Force Field builder to automatically fit parameters for the Martini coarse-grained force field, utilizing all-atom systems as the reference for various systems.

  • Tutorial
Computational Ellipsometry

Learn how to compute the refractive index and extinction coefficient of systems of organic optoelectronics.

  • Tutorial
Ab initio Molecular Dynamics Simulations of Li-ion Diffusion in Solid State Electrolytes

Learn to perform an ab initio molecular dynamics simulation and calculate the Li-ion diffusion in a solid state electrolyte.

  • Tutorial
Phase Diagrams

Plot phase diagrams for a two- and three-component system.

  • Tutorial
Defect Energy Calculation

Learn to generate the defect energy correction for MgO.

  • Tutorial
Optoelectronic Device Designer

Learn to use the Optoelectronic Device Designer panel to design an optoelectronics device structure.

Case Studies

Documentation

  • Documentation
LiveDesign Documentation

Information and instruction on how to use Schrödinger’s LiveDesign platform including user manuals, tutorials, cheatsheets, and workflows.

  • Documentation
Documentation

Comprehensive reference documentation covering panels and workflows.

  • Documentation
Learning Path: Computational Structure Prediction

A structured overview of tools and workflows for predicting biomacromolecular structures in whole or in part.

Events

Educator’s Month Webinars 2025 Event Life Science
  • Jun 1st-30th, 2025
Educator’s Month Webinars 2025

Join us for a series of live webinar presentations throughout June 2025 from leading educators at top academic institutions, as well as talks by Schrödinger scientists.

Educator’s Month 2025 Event Life Science
  • Jun 3rd-27th, 2025
Educator’s Month 2025

Throughout the month, join us for webinars, in-person workshops, and an undergraduate student virtual science fair that will highlight the role of computational tools in the classroom and connect you with educators from all over the world.

NAM29 Event Materials Science
  • Jun 8th-13th, 2025
NAM29

Schrödinger is excited to be participating in the NAM29 conference taking place on June 8th – 13th in Atlanta, Georgia.

Product Videos

Getting Going with Maestro BioLuminate Video Life Science
Getting Going with Maestro BioLuminate

A free video series introducing the basics of using Maestro Bioluminate.

Getting Going with Maestro Video Life Science
Getting Going with Maestro

A free video series introducing the basics of using Maestro.

A Sneak Peek into Renumbering Residues and the Project Table in BioLuminate Video Life Science
A Sneak Peek into Renumbering Residues and the Project Table in BioLuminate

The sixth video in the Getting Going with Maestro BioLuminate Video Series: renaming chains and residues, the Project Table.

Publications

  • Publication
  • Apr 18, 2025
Enabling in-silico Hit Discovery Workflows Targeting RNA with Small Molecules
Chopra, et al. Theoretical and Computational Chemistry, 2025, 1, Preprint
  • Publication
  • Apr 17, 2025
Active Learning FEP: Impact on Performance of AL Protocol and Chemical Diversity
Lonsdale, et al. Journal of Chemical Theory and Computation, 2025

Quick Reference Sheets

  • Quick Reference Sheet
Advanced Structural Queries and SAR Techniques

Learn advanced approaches to structure querying in LiveDesign

  • Quick Reference Sheet
Importing Structures from ChemDraw into LiveDesign

Use keyboard shortcuts to import structures from ChemDraw.

  • Quick Reference Sheet
Exporting Structures, Plots, and LiveReports in LiveDesign

Compounds, plots, or whole LiveReports can be exported into various file formats.

Tutorials

  • Tutorial
Structure-Based Virtual Screening using Glide

Prepare receptor grids for docking, dock molecules and examine the docked poses.

  • Tutorial
Ligand Binding Pose Prediction for FEP+ using Core-Constrained Docking

Generate starting poses for FEP simulations for a series of BACE1 inhibitors using core constrained docking.

  • Tutorial
Antibody Visualization and Modeling in BioLuminate

Visualize, build, and evaluate antibody models, analyze an antibody for various characteristics, dock an antigen to an antibody.

Webinars

Advancing drug discovery programs with machine learning-enhanced de novo design Webinar Life Science
  • May 21, 2025
Advancing drug discovery programs with machine learning-enhanced de novo design

In this webinar, we will demonstrate how large-scale de novo design workflows in Schrödinger’s AutoDesigner, combined with rigorous free energy-based scoring methods, have been applied to several recent programs to overcome critical design challenges. 

Computational insights into polymer excipient selection for amorphous solid dispersions Webinar Life Science Materials Science
  • May 14, 2025
Computational insights into polymer excipient selection for amorphous solid dispersions

In this webinar, we will highlight how molecular models can aid our ability to screen through standard polymer excipients for target lists to push into lab testing.

MAY 14, 2025 | Schrödinger デジタル創薬セミナー17 | Schrödinger’s approach to physics-based antibody analysis and design Webinar Life Science

White Papers

20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS White Paper Life Science
  • Oct 29, 2024
20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS

Glide has long set the gold standard for commercial molecular docking software due to its robust performance in both binding mode prediction and empirical scoring tasks, ease of use, and tight integration with Schrödinger’s Maestro interface and molecular discovery workflows.

QuickShape screening in the age of ultra-large libraries  White Paper Life Science
Jaguar for Life Science White Paper Life Science

Latest insights from Extrapolations blog

With FEP+, “The Experiment is the Limit.”
With FEP+, “The Experiment is the Limit.”

Over the past century, small molecule drugs have represented the dominant modality in drug research, enabling medical breakthroughs that have saved countless lives.

Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods (FEP)
Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods

The complexity and size of drug candidates has grown in recent years as scientists pursue novel targets once considered undruggable.

Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In Blog
Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In

We recently sat down with Edward Miller, Senior Director of Protein Structure Modeling at Schrödinger, to discuss his experience using AlphaFold models for SBDD.

Training & Resources

Online certification courses

Level up your skill set with hands-on, online molecular modeling courses. These self-paced courses cover a range of scientific topics and include access to Schrödinger software and support.

Free learning resources

Learn how to deploy the technology and best practices of Schrödinger software for your project success. Find training resources, tutorials, quick start guides, videos, and more.