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Documentation (opens in a new tab)
  • Tutorial
  • Video
R-Group Enumeration in LiveDesign

Explore the chemical space around a scaffold using R-group libraries.

  • Tutorial
  • Video
Reaction-Based Enumeration Using a Provided Reaction

Select a Schrödinger reaction, configure reactants, explore reaction output options, and generate enumerated products.

  • Tutorial
  • Video
Free Wilson Analysis

Identify high-impact R-group transformations and visualize SAR data to drive the next phase of ideation.

  • Tutorial
  • Video
Create a Multi-Parameter Optimization (MPO) for ADME Analysis

Learn how to add and configure a Multi-Parameter Optimization column (MPO) to evaluate compounds using multiple properties.

Introduction to Workspace Toggles and the Structure Hierarchy in BioLuminate Video Life Science
Introduction to Workspace Toggles and the Structure Hierarchy in BioLuminate

The fifth video in the Getting Going with Maestro BioLuminate Video Series: workspace toggles, the Structure Hierarchy, Adding Antibody Annotations to the Structure Hierarchy, and performing measurements.

A Sneak Peek into Renumbering Residues and the Project Table in BioLuminate Video Life Science
A Sneak Peek into Renumbering Residues and the Project Table in BioLuminate

The sixth video in the Getting Going with Maestro BioLuminate Video Series: renaming chains and residues, the Project Table.

Interacting with and Favoriting Applications in BioLuminate Video Life Science
Interacting with and Favoriting Applications in BioLuminate

The fourth video in the Getting Going with Maestro BioLuminate Video Series: favorites toolbar, navigating the Tasks menu.

Interacting with Objects and Applications in BioLuminate Video Life Science
Interacting with Objects and Applications in BioLuminate

The third video in the Getting Going with Maestro BioLuminate Video Series: ways to use right-clicks in BioLuminate, managing surfaces.

Importing and Rendering Structures in BioLuminate Video Life Science
Importing and Rendering Structures in BioLuminate

The second video in the Getting Going with Maestro BioLuminate Video Series: importing structures from the Protein Data Bank (PDB), selection and inclusion and workspace styling options.

Setting up a BioLuminate Project Video Life Science
Setting up a BioLuminate Project

The first video in the Getting Going with Maestro BioLuminate Video Series: changing your working directory, saving projects, and more.

Setting up a Maestro Project Video Life Science
Setting up a Maestro Project

The first video in the Getting Going with Maestro Video Series: the working directory, saving a project, and customizing mouse actions.

Targeted R-Group Enumeration with the Ligand Designer in Maestro Video Life Science
Targeted R-Group Enumeration with the Ligand Designer in Maestro

The eleventh video in the Getting Going with Maestro Video Series: R-Group Enumeration and docking with the Ligand Designer, customizing an MPO, post-processing Ligand Designer outputs.

Events

The Battery Show 2026 Event Materials Science
  • Oct 12th-15th, 2026
The Battery Show 2026

Schrödinger is excited to be participating in the The Battery Show 2026 conference taking place on October 12th – 15th in Detroit, Michigan.

Accelerating Biologics Discovery: An End-to-End Workflow with BioLuminate and LiveDesign Event Life Science
  • Oct 12, 2026
Accelerating Biologics Discovery: An End-to-End Workflow with BioLuminate and LiveDesign

We are inviting you to join us in an interactive and free-of-charge session on Monday, October 12th at Pullman Basel Europe in Basel for our “Accelerating Biologics Discovery: An End-to-End Workflow with BioLuminate and LiveDesign” event.

Festival of Biologics Basel 2026 Event Life Science
  • Oct 13th-15th, 2026
Festival of Biologics Basel 2026

Schrödinger is excited to be participating in the Festival of Biologics 2026 conference taking place on October 13th – 15th in Basel, Switzerland.

Webinars

Advanced chemical space exploration for the discovery of mutant-selective EGFR inhibitors Webinar Life Science
  • Oct 22, 2026
Advanced chemical space exploration for the discovery of mutant-selective EGFR inhibitors

In this webinar, Schrödinger’s medicinal and computational chemists will show how they tackled the EGFR triple-mutant problem by coupling industry-leading free energy perturbation technology (FEP+) with de novo design workflows to effectively explore novel chemical space and identify reversible inhibitor scaffolds.

Schrödinger デジタル創薬セミナー~計算化学がもたらす創薬プロセスの変貌~第25回 Webinar Life Science
  • Nov 5, 2026
Schrödinger デジタル創薬セミナー~計算化学がもたらす創薬プロセスの変貌~第25回

Schrödingerの計算化学プラットフォームによるタンパク質設計技術の紹介と、課題対応・開発加速への活用法を詳しく解説します。

Bunsen: Where Validated Scientific Workflows Meet Agentic AI Webinar Life Science Materials Science
  • Sep 23, 2026
Bunsen: Where Validated Scientific Workflows Meet Agentic AI

Join Schrödinger CTO Pat Lorton for an introduction to Bunsen. Pat will share how Bunsen allows researchers to set up, run, and troubleshoot multi-stage workflows without command-line friction or manual setup.

Tutorials

  • Tutorial
Structure-Based Virtual Screening using Glide

Prepare receptor grids for docking, dock molecules and examine the docked poses.

  • Tutorial
Ligand Binding Pose Generation for FEP+

Generate starting poses for FEP simulations for a series of BACE1 inhibitors using core constrained docking.

  • Tutorial
Homology Modeling of Protein-Ligand Binding Sites with IFD-MD

Create a homology model of TYK2 from JAK3 and including a bound ligand. Compare this model with the crystal structure for TYK2 bound to 4GIH.

Training Videos

Getting Going with Maestro BioLuminate Video Life Science
Getting Going with Maestro BioLuminate

A free video series introducing the basics of using Maestro Bioluminate.

Getting Going with Maestro Video Life Science
Getting Going with Maestro

A free video series introducing the basics of using Maestro.

  • Tutorial
  • Video
The LiveDesign Assistant

Learn how to build and adjust coloring rules, create Freeform and Formula columns, and plot data using the LiveDesign Assistant.

Publications

Case Studies

White Papers

FEP+ Pose Builder — maximizing utility and productivity in FEP simulations White Paper Life Science
  • Jan 29, 2026
FEP+ Pose Builder — maximizing utility and productivity in FEP simulations

FEP+ Pose Builder is a methodological advancement introduced as an integrated feature to drastically enhance accessibility, user-friendliness, and productivity within the FEP+ pipeline.

20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS White Paper Life Science
  • Oct 29, 2024
20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS

Glide has long set the gold standard for commercial molecular docking software due to its robust performance in both binding mode prediction and empirical scoring tasks, ease of use, and tight integration with Schrödinger’s Maestro interface and molecular discovery workflows.

QuickShape screening in the age of ultra-large libraries  White Paper Life Science

Quick Reference Sheets

  • Quick Reference Sheet
Force Field Builder

A one-page guide to calculate missing torsion parameters for ligands using the Force Field Builder panel.

  • Quick Reference Sheet
Ligand Interaction Diagram

A one-page guide to using the Ligand Interaction Diagram for examining ligand-receptor interactions.

  • Quick Reference Sheet
GlideMap

A one-page guide to using the GlideMap GUI for ligand placement guided by experimental density.

Latest insights from Extrapolations blog

With FEP+, “The Experiment is the Limit.”
With FEP+, “The Experiment is the Limit.”

Over the past century, small molecule drugs have represented the dominant modality in drug research, enabling medical breakthroughs that have saved countless lives.

Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods (FEP)
Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods

The complexity and size of drug candidates has grown in recent years as scientists pursue novel targets once considered undruggable.

Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In Blog
Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In

We recently sat down with Edward Miller, Senior Director of Protein Structure Modeling at Schrödinger, to discuss his experience using AlphaFold models for SBDD.

Training & Resources

Online certification courses

Level up your skill set with hands-on, online molecular modeling courses. These self-paced courses cover a range of scientific topics and include access to Schrödinger software and support.

Free learning resources

Learn how to deploy the technology and best practices of Schrödinger software for your project success. Find training resources, tutorials, quick start guides, videos, and more.