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AutoDesigner, a De Novo Design Algorithm for Rapidly Exploring Large Chemical Space for Lead Optimization Webinar Life Science
  • May 12, 2022
AutoDesigner, a De Novo Design Algorithm for Rapidly Exploring Large Chemical Space for Lead Optimization

The lead optimization stage of a drug discovery program generally involves the design, synthesis, and assaying of hundreds to thousands of compounds.

Structure-based Target Validation 薛定谔中文网络培训系列|基于结构的靶点验证 Webinar Life Science
  • May 5, 2022
Structure-based Target Validation 薛定谔中文网络培训系列|基于结构的靶点验证

本培训我们将演示在开展新靶标研发之前所需要的验证工作,其中包括

Virtual Screening and Ligand Design using Small-Molecule Drug Discovery Suite Webinar Life Science
Trends in modern hit discovery: How your ultra-large screens can benefit from machine learning Webinar Life Science
  • Feb 2, 2022
Trends in modern hit discovery: How your ultra-large screens can benefit from machine learning

While traditional structure-based virtual screening has been successful in finding diverse hits to advance projects there is significant room for improvement of hit rates, diversity of hit chemotypes, available IP space explored, and the potency of unoptimized hits.

Optimizing Protein Stability Using New Computational Design Approaches for Biologics Webinar Life Science
  • Nov 18, 2021
Optimizing Protein Stability Using New Computational Design Approaches for Biologics

Physical stability is a key determinant of the clinical and commercial success of biological therapeutics, vaccines, diagnostics, enzymes, and other protein-based products.

Limited Experimental Data? No Problem: Machine Learning and Physics in Preclinical Drug Discovery Webinar Life Science
  • Aug 31, 2021
Limited Experimental Data? No Problem: Machine Learning and Physics in Preclinical Drug Discovery

In this webinar, we provide three practical examples of the application of machine learning in active drug discovery programs.

Library design: New enumeration tools for lead optimization and idea generation Webinar Life Science
SARS-CoV-2 main protease inhibitors: Physics-based approaches to the discovery of COVID-19 antivirals Webinar Life Science
  • Jul 14, 2021
SARS-CoV-2 main protease inhibitors: Physics-based approaches to the discovery of COVID-19 antivirals

In this webinar, we focus on the medicinal and computational chemistry driven discovery of main protease inhibitors.

An Introduction to Automating Workflows with KNIME Webinar Life Science
  • Nov 5, 2016
An Introduction to Automating Workflows with KNIME

In this webinar, we give a brief overview on how to get started with KNIME and use Schrödinger Nodes to create workflows for use within KNIME and Maestro.

Design and Optimization of Biologics Driven by Physics-Based Computational Modeling Webinar Life Science
  • Jun 15, 2021
Design and Optimization of Biologics Driven by Physics-Based Computational Modeling

In this webinar, we address the important role that computational modeling can play in accelerating the discovery and development of novel biologics.

Computational workflows for bifunctional degrader design Webinar Life Science
Creating workflows with KNIME – Beyond the basics Webinar Life Science
  • Nov 5, 2018
Creating workflows with KNIME – Beyond the basics

In this webinar, we introduce some more advanced concepts to help you create more complex workflows.

Events

Formulation ML and Optimization: Making advanced property prediction and experimental design fast and accessible Webinar Materials Science
  • Jan 21, 2026
Formulation ML and Optimization: Making advanced property prediction and experimental design fast and accessible

We will showcase how easy it is to apply these tools using experimental datasets across broad MS applications, including formulations, consumer goods, batteries, pharmaceuticals, and beyond.

From silos to synthesis: Fostering collaborative AI through platform integration with LiveDesign ML Webinar Life Science
  • Jan 29, 2026
From silos to synthesis: Fostering collaborative AI through platform integration with LiveDesign ML

Successfully leveraging AI investments demands a platform that delivers unparalleled predictive accuracy and seamless operationalization.

3rd Industrial Polymers & CPG Summit 2026 Event Materials Science
  • Feb 3rd-4th, 2026
3rd Industrial Polymers & CPG Summit 2026

We are pleased to invite you to the 3rd Industrial Polymers & CPG Summit. Mark your calendars for February 3-4, 2026, in the picturesque city of Heidelberg.

Webinars

From silos to synthesis: Fostering collaborative AI through platform integration with LiveDesign ML Webinar Life Science
  • Jan 29, 2026
From silos to synthesis: Fostering collaborative AI through platform integration with LiveDesign ML

Successfully leveraging AI investments demands a platform that delivers unparalleled predictive accuracy and seamless operationalization.

Schrödinger デジタル創薬セミナー: Into the Clinic ~計算化学がもたらす創薬プロセスの変貌~ 第21回 Webinar Life Science
Scaling FEP+ for success: Strategic deployment of FEP+ and AI/ML to accelerate chemical space exploration Webinar Life Science
  • Dec 10, 2025
Scaling FEP+ for success: Strategic deployment of FEP+ and AI/ML to accelerate chemical space exploration

Join us to map out your strategy for maximizing the organizational impact of FEP+ and to achieve the full potential of your computational drug discovery and business goals. 

Documentation

  • Documentation
Learning Path: Oligonucleotide Modeling

A structured overview of tools and workflows for nucleic acids in drug discovery.

  • Documentation
WaterMap

Efficiently converged MD simulations are run with explicit water molecules, and resultant trajectories are analyzed to cluster hydration sites.

  • Documentation
SiteMap

Identify binding sites, including allosteric binding sites and protein-protein interfaces, and evaluate their druggability.

Tutorials

  • Tutorial
Structure-Based Virtual Screening using Glide

Prepare receptor grids for docking, dock molecules and examine the docked poses.

  • Tutorial
Ligand Binding Pose Prediction for FEP+

Generate starting poses for FEP simulations for a series of BACE1 inhibitors using core constrained docking.

  • Tutorial
Antibody Visualization and Modeling in BioLuminate

Visualize, build, and evaluate antibody models, analyze an antibody for various characteristics, dock an antigen to an antibody.

Training Videos

Getting Going with Maestro BioLuminate Video Life Science
Getting Going with Maestro BioLuminate

A free video series introducing the basics of using Maestro Bioluminate.

Getting Going with Maestro Video Life Science
Getting Going with Maestro

A free video series introducing the basics of using Maestro.

  • Video
Introducing Ligand Designer

An overview of the LigandDesigner workflow, Editing in 2D and 3D, using display options and overlays, and accessing the Admin Panel.

Publications

Case Studies

White Papers

20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS White Paper Life Science
  • Oct 29, 2024
20 Years of Glide: A Legacy of Docking Innovation and the Next Frontier with Glide WS

Glide has long set the gold standard for commercial molecular docking software due to its robust performance in both binding mode prediction and empirical scoring tasks, ease of use, and tight integration with Schrödinger’s Maestro interface and molecular discovery workflows.

QuickShape screening in the age of ultra-large libraries  White Paper Life Science
Jaguar for Life Science White Paper Life Science

Quick Reference Sheets

  • Quick Reference Sheet
GlideMap

A one-page guide to using the GlideMap GUI for ligand placement guided by experimental density.

  • Quick Reference Sheet
Synthesis Queue LiveReport

Use Freeform columns to track the status of compounds in a synthesis queue.

  • Quick Reference Sheet
Modeling Queue LiveReport

Learn how to use Freeform columns and an Auto-Update Search to create compound progression workflows.

Latest insights from Extrapolations blog

With FEP+, “The Experiment is the Limit.”
With FEP+, “The Experiment is the Limit.”

Over the past century, small molecule drugs have represented the dominant modality in drug research, enabling medical breakthroughs that have saved countless lives.

Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods (FEP)
Tackling Drug Solubility: AbbVie and Schrödinger Collaborate to Advance Accurate Prediction Methods

The complexity and size of drug candidates has grown in recent years as scientists pursue novel targets once considered undruggable.

Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In Blog
Can AlphaFold Models be Used for Structure-Based Drug Design? A Perspective Two Years In

We recently sat down with Edward Miller, Senior Director of Protein Structure Modeling at Schrödinger, to discuss his experience using AlphaFold models for SBDD.

Training & Resources

Online certification courses

Level up your skill set with hands-on, online molecular modeling courses. These self-paced courses cover a range of scientific topics and include access to Schrödinger software and support.

Free learning resources

Learn how to deploy the technology and best practices of Schrödinger software for your project success. Find training resources, tutorials, quick start guides, videos, and more.